CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID TaAffx.16068.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.2 TaAffx.16068.1.S1_at BQ168935 - - 1e+0 At1g33260 protein kinase family protein S.X. H.G.
0.67 86.3 Ta.6965.1.S1_at BJ313225 - - 3e+0 At3g03847 auxin-responsive family protein S.X. H.G.
0.60 81.0 TaAffx.91428.1.S1_at BJ313181 - - 3e+0 At4g21450 vesicle-associated membrane family protein / VAMP family protein S.X. H.G.
0.56 78.6 Ta.30534.1.S1_at BJ287888 - - 2e+0 At2g20830 folic acid binding / transferase S.X. H.G.
0.55 76.8 Ta.23990.1.A1_at CA722311 - - 4e+0 At3g11020 DREB2B (DRE/CRT-BINDING PROTEIN 2B) S.X. H.G.
0.53 74.9 Ta.14323.1.S1_at BU100287 - - 1e+1 At4g18593 dual specificity protein phosphatase-related S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
24.8 99.8 GSM298092 Crown tissue of Solstice at 3 weeks post germination GSE11774 Expression data from cold treated wheat cultivars
20.7 99.7 GSM314269 tissue type: immature inflorescence - rep1 GSE12508 Transcription patterns during wheat development
18.4 99.7 GSM298073 Crown tissue of Paragon at 5 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
17.2 99.6 GSM298064 Crown tissue of Harnesk at 9 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
16.1 99.6 GSM298062 Crown tissue of Harnesk at 5 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
15.9 99.6 GSM298094 Crown tissue of Solstice at 9 weeks post germination GSE11774 Expression data from cold treated wheat cultivars
15.2 99.6 GSM298063 Crown tissue of Harnesk at 9 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
13.9 99.5 GSM298087 Crown tissue of Solstice at 9 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
13.8 99.5 GSM298093 Crown tissue of Solstice at 5 weeks post germination GSE11774 Expression data from cold treated wheat cultivars
13.4 99.5 GSM298088 Crown tissue of Solstice at 9 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 1e-6 54 Ta.20961.2.S1_at CA628617 - - 4e+0 At1g70690 HWI1 (HOPW1-1-INDUCED GENE1) C.G. S.X.
0.03 3e-1 36 Ta.9497.2.A1_at CA697062 - - 4e+0 At5g66350 SHI (SHORT INTERNODES) C.G. S.X.
0.01 1e+0 34 Ta.22762.2.S1_at CA623562 - - 1e-12 At3g63140 CSP41A (CHLOROPLAST STEM-LOOP BINDING PROTEIN OF 41 KDA) C.G. S.X.
0.03 5e+0 32 TaAffx.8224.1.S1_at CA631080 - - 7e-2 At3g51010 unknown protein C.G. S.X.
0.03 5e+0 32 TaAffx.81857.1.S1_at CA680999 - - 3e-4 At1g16320 unknown protein C.G. S.X.
0.03 5e+0 32 TaAffx.122780.1.S1_at BJ317470 - - 4e+0 At1g02550 invertase/pectin methylesterase inhibitor family protein C.G. S.X.
0.01 5e+0 32 Ta.4227.1.S1_x_at CK169620 - - 2e-38 At3g19760 eukaryotic translation initiation factor 4A, putative / eIF-4A, putative / DEAD box RNA helicase, putative C.G. S.X.
0.03 5e+0 32 Ta.27707.1.S1_at CD929369 - - 5e+0 At1g47660 unknown protein C.G. S.X.
0.02 5e+0 32 Ta.15308.1.S1_at CD927486 - - 3e+0 At1g70895 CLE17 (CLAVATA3/ESR-RELATED 17) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e+0 34 Arabidopsis thaliana At1g33260 840220 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA - - - C.G. S.X.
0.03 4e-1 36 Glycine max Gma.6787.1.S1_at BU544977 - - 7e-2 At5g33340 CDR1 (CONSTITUTIVE DISEASE RESISTANCE 1) C.G. S.X.
0.07 7e-16 83 Hordeum vulgare Contig13436_at Contig13436 - - 3e-1 At3g23200 unknown protein C.G. S.X.
0.04 2e-9 63 Oryza sativa Os.4882.1.S2_at - - - 0 C.G. S.X.
0.04 6e+0 32 Populus trichocarpa PtpAffx.52175.1.A1_at CK095438 - - 1e+1 At5g54450 unknown protein C.G. S.X.
0.03 3e-1 34 Vitis vinifera 1611877_at CF372971 hypothetical protein LOC100247278 - 4e-22 At2g31060 elongation factor family protein C.G. S.X.
0.05 5e-10 63 Zea mays Zm.8074.1.A1_at BM072842 hypothetical protein LOC100277124 - 4e-1 At1g52720 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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