Gene omics information

Query gene ID TaAffx.15154.2.S1_s_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9498.9TaAffx.15154.2.S1_s_atCA744371--9e-1At3g62030peptidyl-prolyl cis-trans isomerase, chloroplast / cyclophilin / rotamase / cyclosporin A-binding protein (ROC4)S.X.H.G.
0.7589.8Ta.13274.2.A1_atCA613778--7e-2At5g05360unknown proteinS.X.H.G.
0.7389.1Ta.11430.1.S1_atCA637362--4e+0At4g39860unknown proteinS.X.H.G.
0.7188.0Ta.6692.2.A1_atCA678021--1e-6At4g36960RNA recognition motif (RRM)-containing proteinS.X.H.G.
0.7087.2TaAffx.78296.1.S1_atCA734700--8e-1At5g45700NLI interacting factor (NIF) family proteinS.X.H.G.
0.6786.3Ta.28190.2.S1_a_atCA654134--7e-2At5g07620protein kinase family proteinS.X.H.G.
0.6383.1TaAffx.8084.2.S1_atCA742580--3e-2At5g02480-S.X.H.G.
0.5979.8Ta.3378.2.A1_atCA666300--2e-1At5g12390FIS1B (FISSION 1B)S.X.H.G.
0.5072.4Ta.11134.2.S1_atCA607725--1e+0At1g23770F-box family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
23.199.8GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription survey
20.199.7GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
11.699.3GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
10.499.2GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.598.3GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.997.3GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
4.997.3GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.697.0GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.697.0GSM298064Crown tissue of Harnesk at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
3.595.4GSM111248genotype F87 developing seed at 5 days after anthesis, biological rep1GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.930743TaAffx.15154.2.S1_atCA744371--9e-1At3g62030peptidyl-prolyl cis-trans isomerase, chloroplast / cyclophilin / rotamase / cyclosporin A-binding protein (ROC4)C.G.S.X.
0.419e-177619TaAffx.15154.1.S1_atCD883346--4e-30At3g21160mannosyl-oligosaccharide 1,2-alpha-mannosidase, putativeC.G.S.X.
0.419e-177619TaAffx.15154.1.S1_s_atCD883346--4e-30At3g21160mannosyl-oligosaccharide 1,2-alpha-mannosidase, putativeC.G.S.X.
0.061e-654TaAffx.50224.1.S1_atCA744244--9e-1At5g05040-C.G.S.X.
0.051e-654TaAffx.50091.1.S1_atCA746390--5e-12At3g18370ATSYTFC.G.S.X.
0.071e-654TaAffx.23466.1.S1_atCA734832--3e+0At2g26290ARSK1 (root-specific kinase 1)C.G.S.X.
0.061e-654TaAffx.23079.1.S1_atCA725884--8e-1At1g24250paired amphipathic helix repeat-containing proteinC.G.S.X.
0.061e-654TaAffx.105165.1.S1_atCA738299--3e+0At2g18320-C.G.S.X.
0.071e-654TaAffx.104904.1.S1_x_atCA743138--5e-1At5g50423-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.039e-134Arabidopsis thalianaAt3g62030825376peptidyl-prolyl cis-trans isomerase, chloroplast / cyclophilin / rotamase / cyclosporin A-binding protein (ROC4)nuclear-encoded chloroplast stromal cyclophilin CYP20-3 (also known as ROC4). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.---C.G.S.X.
0.071e-344Glycine maxGmaAffx.89866.1.A1_x_atCK605817--4e+0At3g07590small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putativeC.G.S.X.
0.481e-161567Hordeum vulgareContig7646_atContig7646--9e-6At1g51590mannosyl-oligosaccharide 1,2-alpha-mannosidase, putativeC.G.S.X.
0.052e-963Oryza sativaOs04g0606400AK102588.1-Mannosyl-oligosaccharide 1,2-alpha-mannosidase (EC3.2.1.113)4e-22At3g21160mannosyl-oligosaccharide 1,2-alpha-mannosidase, putativeC.G.S.X.
0.045e+032Populus trichocarpaPtpAffx.22516.2.S1_a_atBU861381hypothetical protein-5e-2At1g78890unknown proteinC.G.S.X.
0.034e+030Vitis vinifera1622200_atCF415664hypothetical protein LOC100245092-8e-5At5g66590allergen V5/Tpx-1-related family proteinC.G.S.X.
0.047e-959Zea maysZm.5433.1.A1_atAW927728--1e-31At3g21160mannosyl-oligosaccharide 1,2-alpha-mannosidase, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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