Gene omics information

Query gene ID	TaAffx.13383.1.A1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.57	79.2	TaAffx.13383.1.A1_at	BG904557	-	-	8e-1	At1g17800	plastocyanin-like domain-containing protein	S.X.	H.G.	Please select
0.73	89.1	Ta.9217.1.S1_at	BT009612.1	-	-	1e-1	At2g22490	CYCD2	S.X.	H.G.	Please select
0.50	72.4	Ta.5909.3.A1_x_at	BJ298528	-	-	7e+0	At4g27350	unknown protein	S.X.	H.G.	Please select
0.50	72.4	TaAffx.76554.1.A1_at	BJ307578	-	-	1e+0	At5g54320	unknown protein	S.X.	H.G.	Please select
0.40	58.4	Ta.7363.1.A1_at	BJ276427	-	-	2e+0	At5g61090	nucleic acid binding	S.X.	H.G.	Please select
0.38	54.7	Ta.7428.2.A1_a_at	CA736575	-	-	2e+0	At3g04780	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
8.5	98.9	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.1	98.5	GSM139926	Anther tetrads rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.0	98.5	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.7	98.4	GSM314270	tissue type: immature inflorescence - rep2	GSE12508	Transcription patterns during wheat development
5.9	98.0	GSM139930	Anther immature pollen rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.6	97.8	GSM139920	Anther diplotene-anaphaseI rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.2	97.5	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development
5.0	97.4	GSM314284	tissue type: 22 DAP embryo - rep1	GSE12508	Transcription patterns during wheat development
4.9	97.3	GSM139922	Anther telophaseI-telophaseII rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.8	97.2	GSM139919	Anther diplotene-anaphaseI rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.28	1e-46	186	Ta.10269.3.S1_at	BJ236928	-	-	2e-1	At1g22280	protein phosphatase 2C, putative / PP2C, putative	C.G.	S.X.	Please select
0.25	2e-10	65	Ta.7471.1.A1_at	BJ274450	-	-	2e-2	At3g12970	unknown protein	C.G.	S.X.	Please select
0.13	4e-9	61	Ta.6762.2.A1_at	BJ310747	-	-	2e-2	At5g23903	unknown protein	C.G.	S.X.	Please select
0.08	2e-4	46	Ta.5575.2.A1_at	BJ265016	-	-	1e+0	At3g22300	RPS10 (RIBOSOMAL PROTEIN S10)	C.G.	S.X.	Please select
0.11	2e-4	46	Ta.11068.1.A1_at	BQ168479	-	-	6e+0	At3g61060	AtPP2-A13 (Arabidopsis thaliana phloem protein 2-A13)	C.G.	S.X.	Please select
0.05	9e-4	44	Ta.11058.1.S1_at	CD920958	-	-	1e+0	At1g80100	AHP6 (ARABIDOPSIS HISTIDINE PHOSPHOTRANSFER PROTEIN 6)	C.G.	S.X.	Please select
0.05	9e-1	34	TaAffx.84329.1.S1_at	CA639457	-	-	2e+0	At5g14130	peroxidase, putative	C.G.	S.X.	Please select
0.04	9e-1	34	TaAffx.37964.1.S1_at	BJ257083	-	-	7e-2	At5g64920	CIP8 (COP1-INTERACTING PROTEIN 8)	C.G.	S.X.	Please select
0.03	9e-1	34	TaAffx.11113.1.S1_at	BQ609261	-	-	1e+0	At4g21720	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	8e-1	34	Arabidopsis thaliana	At1g17800	838358	plastocyanin-like domain-containing protein	F:electron carrier activity, copper ion binding;P:unknown;C:endomembrane system;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	5e+0	32	Glycine max	GmaAffx.86415.1.S1_at	BG551444	-	-	2e+0	At1g14990	unknown protein	C.G.	S.X.	Please select
0.25	3e-48	190	Hordeum vulgare	Contig21216_at	Contig21216	-	-	2e+0	At3g12760	-	C.G.	S.X.	Please select
0.04	1e-1	38	Oryza sativa	Os01g0511600	AK072161.1	-	Hypothetical protein	9e-8	At1g32080	membrane protein, putative	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	1e+0	34	Populus trichocarpa	PtpAffx.218963.1.S1_at	pmrna34734	hypothetical protein	-	2e-1	At4g13480	AtMYB79 (myb domain protein 79)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	4e+0	30	Vitis vinifera	1621841_at	BQ796797	hypothetical protein LOC100258708	-	9e-3	Atcg01000	-	C.G.	S.X.	Please select
0.05	6e+0	30	Zea mays	ZmAffx.1099.1.A1_at	AW129800	-	-	2e+1	At4g32340	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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