CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID TaAffx.13285.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.85 93.8 TaAffx.13285.1.S1_at BG910034 - - 3e+0 At5g62210 embryo-specific protein-related S.X. H.G.
0.54 75.5 TaAffx.64591.1.S1_at BJ288225 - - 1e+0 At1g19010 unknown protein S.X. H.G.
0.51 73.0 Ta.19063.1.S1_at CA646746 - - 4e+0 At5g23290 PDF5 (PREFOLDIN 5) S.X. H.G.
0.49 69.7 TaAffx.29653.1.S1_at CA637989 - - 1e+1 At5g65230 AtMYB53 (myb domain protein 53) S.X. H.G.
0.45 65.2 TaAffx.112205.1.S1_at CA626060 - - 4e+0 At2g36160 40S ribosomal protein S14 (RPS14A) S.X. H.G.
0.45 65.2 TaAffx.59306.1.S1_at CA603735 - - 1e+0 At4g22570 APT3 (ADENINE PHOSPHORIBOSYL TRANSFERASE 3) S.X. H.G.
0.44 64.5 TaAffx.78717.1.S1_at CA728365 - - 3e+0 At2g24570 WRKY17 S.X. H.G.
0.44 64.5 TaAffx.120295.1.S1_at BJ232977 - - 2e+1 At5g42504 unknown protein S.X. H.G.
0.44 64.5 TaAffx.129082.2.S1_at CA610797 - - 4e-3 At1g58280 - S.X. H.G.
0.44 64.5 TaAffx.30726.1.S1_at CA622623 - - 1e+1 At5g20500 glutaredoxin, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
22.9 99.8 GSM298067 Leaf tissue of Paragon at 5 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
10.2 99.2 GSM298070 Leaf tissue of Paragon at 9 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
8.8 98.9 GSM111233 genotype H8 developing seed at 5 days after anthesis, biological rep2 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
7.9 98.7 GSM139928 Anther immature pollen rep1 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.2 98.1 GSM298069 Leaf tissue of Paragon at 9 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
5.3 97.6 GSM298092 Crown tissue of Solstice at 3 weeks post germination GSE11774 Expression data from cold treated wheat cultivars
4.7 97.1 GSM139926 Anther tetrads rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.2 96.6 GSM250896 Tc_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.1 94.5 GSM250898 TcLr1_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.1 94.5 GSM250890 Tc_3dpi_inoculated_rep2 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 3e-3 42 Ta.10234.3.S1_x_at BJ246096 - - 3e-1 At2g23780 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.03 3e-3 42 Ta.10234.2.S1_at BJ256580 - - 5e-1 At5g54630 zinc finger protein-related C.G. S.X.
0.03 3e-3 42 Ta.10234.2.S1_x_at BJ256580 - - 5e-1 At5g54630 zinc finger protein-related C.G. S.X.
0.04 1e-2 40 TaAffx.11250.2.S1_x_at BJ218406 - - 3e-1 At3g24350 SYP32 (SYNTAXIN OF PLANTS 32) C.G. S.X.
0.04 1e-2 40 TaAffx.11250.2.S1_s_at BJ218406 - - 3e-1 At3g24350 SYP32 (SYNTAXIN OF PLANTS 32) C.G. S.X.
0.03 1e-2 40 TaAffx.11250.1.S1_at BJ239583 - - 1e-1 At1g68220 unknown protein C.G. S.X.
0.02 1e-2 40 Ta.5908.1.S1_at BJ291902 - - 3e-3 At5g65165 SDH2-3 C.G. S.X.
0.04 2e-1 36 TaAffx.81007.1.S1_at CA690338 - - 2e+1 At5g19875 unknown protein C.G. S.X.
0.04 2e-1 36 TaAffx.6267.1.S1_at CA689024 - - 2e+1 At4g14420 lesion inducing protein-related C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 3e+0 32 Arabidopsis thaliana At5g62210 836342 embryo-specific protein-related F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;MPOFVBA - - - C.G. S.X.
0.06 3e-1 36 Glycine max GmaAffx.12732.1.S1_at AW099055 - - 6e-1 At5g04853 unknown protein C.G. S.X.
0.04 4e-1 34 Hordeum vulgare Contig9342_at Contig9342 - - 7e-7 At2g22670 IAA8 C.G. S.X.
0.03 4e-1 36 Oryza sativa Os04g0465100 9632.m03698 - Haem peroxidase, plant/fungal/bacterial familyprotein 1e-4 At5g40150 peroxidase, putative C.G. S.X.
0.05 4e-3 42 Populus trichocarpa PtpAffx.127302.1.A1_at CV274851 - - 4e+0 At5g45660 unknown protein C.G. S.X.
0.03 9e-1 32 Vitis vinifera 1621370_at CB982464 hypothetical protein LOC100263147 - 2e-42 At1g02140 MAGO (MAGO NASHI) C.G. S.X.
0.05 3e-1 34 Zea mays Zm.14028.3.A1_at BG841009 hypothetical protein LOC100192735 - 8e-6 At1g50490 UBC20 (ubiquitin-conjugating enzyme 20) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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