Gene omics information

Query gene ID TaAffx.130819.2.A1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6383.1TaAffx.130819.2.A1_atBJ282311--4e-14At3g02290zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.4058.4Ta.8462.2.A1_atCA649919--4e+0At5g25960unknown proteinS.X.H.G.
0.3346.9Ta.24303.1.A1_atCD454649--5e-1At1g29110cysteine proteinase, putativeS.X.H.G.
0.2939.2TaAffx.130819.1.A1_atBG607589--4e-9At3g02290zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.1719.8Ta.7210.1.S1_a_atCK212620--5e-2At3g61350SKIP4 (SKP1 INTERACTING PARTNER 4)S.X.H.G.
0.1618.2Ta.18528.2.S1_a_atCA596497--4e-37At2g32980unknown proteinS.X.H.G.
0.1618.2TaAffx.2433.1.S1_atCA601863--4e+0At1g04190tetratricopeptide repeat (TPR)-containing proteinS.X.H.G.
0.1415.8Ta.11271.1.A1_atBQ169744--5e-1At5g10400histone H3S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
9.099.0GSM298076Crown tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
8.698.9GSM314286tissue type: 22 DAP embryo - rep3GSE12508Transcription patterns during wheat development
6.798.4GSM298075Crown tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
6.698.3GSM314285tissue type: 22 DAP embryo - rep2GSE12508Transcription patterns during wheat development
5.197.5GSM314270tissue type: immature inflorescence - rep2GSE12508Transcription patterns during wheat development
4.697.0GSM314284tissue type: 22 DAP embryo - rep1GSE12508Transcription patterns during wheat development
4.296.6GSM314269tissue type: immature inflorescence - rep1GSE12508Transcription patterns during wheat development
4.296.6GSM314275tissue type: pistil, before anthesis - rep1GSE12508Transcription patterns during wheat development
3.896.0GSM298064Crown tissue of Harnesk at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
3.294.8GSM298059Crown tissue of Harnesk at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.463e-135482TaAffx.130819.1.A1_atBG607589--4e-9At3g02290zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.032e-448TaAffx.4545.1.S1_atCA738424--5e-1At5g33393unknown proteinC.G.S.X.
0.022e-448Ta.608.2.S1_a_atCK169853--4e-8At5g09920NRPB4C.G.S.X.
0.022e-448Ta.608.2.S1_x_atCK169853--4e-8At5g09920NRPB4C.G.S.X.
0.022e-448Ta.608.2.S1_atCK169853--4e-8At5g09920NRPB4C.G.S.X.
0.036e-446TaAffx.50131.1.S1_atCA745575--9e+0At5g37474-C.G.S.X.
0.026e-446TaAffx.129413.1.S1_atBE492820--4e-7At5g50810TIM8C.G.S.X.
0.026e-446Ta.9467.1.S1_atCK155101--2e+0At3g50860clathrin adaptor complex small chain family proteinC.G.S.X.
0.026e-446Ta.7771.1.A1_s_atCD876481--4e-1At1g06630-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.104e-1479Arabidopsis thalianaAt3g02290821179zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:N-terminal protein myristoylation;C:unknown;MPOFVB---C.G.S.X.
0.116e-1479Glycine maxGma.13067.1.S1_atCD394877--1e-25At3g02290zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.820956Hordeum vulgareContig12256_atContig12256--2e-10At5g15790zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.331e-49198Oryza sativaOs01g0926200AK066457.1-Zn-finger, RING domain containing protein2e-5At3g02290zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.106e-550Populus trichocarpaPtp.5639.1.S1_atCV257667hypothetical protein-3e-9At5g38895zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.157e-444Vitis vinifera1618199_atCD802229hypothetical protein LOC100247128-7e-8At5g15790zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.273e-56218Zea maysZm.12470.1.A1_atCN844304protein binding protein-2e-13At5g38895zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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