Gene omics information

Query gene ID TaAffx.130048.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.2TaAffx.130048.1.S1_atCK214343--2e+0At3g53530heavy-metal-associated domain-containing proteinS.X.H.G.
0.4464.5Ta.9896.1.S1_atBQ166475--5e-1At5g10390histone H3S.X.H.G.
0.2329.0Ta.6465.1.S1_s_atBJ253753--4e-9At1g34220unknown proteinS.X.H.G.
0.056.7Ta.2372.1.S1_atBJ276981--4e-9At3g02540RAD23-3 (PUTATIVE DNA REPAIR PROTEIN RAD23-3)S.X.H.G.
0.045.8Ta.10888.1.S1_atBQ166763--5e-4At3g07790DGCR14-relatedS.X.H.G.
0.034.7TaAffx.12820.1.A1_atBJ230818--4e+0At5g42630ATS (ABERRANT TESTA SHAPE)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
22.499.8GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
11.899.3GSM314289tissue type: 22 DAP endosperm - rep3GSE12508Transcription patterns during wheat development
10.399.2GSM314276tissue type: pistil, before anthesis - rep2GSE12508Transcription patterns during wheat development
9.199.0GSM314288tissue type: 22 DAP endosperm - rep2GSE12508Transcription patterns during wheat development
7.198.5GSM314275tissue type: pistil, before anthesis - rep1GSE12508Transcription patterns during wheat development
5.797.9GSM314287tissue type: 22 DAP endosperm - rep1GSE12508Transcription patterns during wheat development
4.596.9GSM314272tissue type: floral bracts, before anthesis - rep1GSE12508Transcription patterns during wheat development
4.596.9GSM139926Anther tetrads rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.396.7GSM111232genotype H8 developing seed at 5 days after anthesis, biological rep1GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
4.196.4GSM138153genotype G32 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.305e-84311TaAffx.130048.3.S1_atCA608883--3e+0At3g27270-C.G.S.X.
0.449e-49194TaAffx.130048.2.S1_x_atCA630478--3e-1At5g50030invertase/pectin methylesterase inhibitor family proteinC.G.S.X.
0.449e-49194TaAffx.130048.2.S1_atCA630478--3e-1At5g50030invertase/pectin methylesterase inhibitor family proteinC.G.S.X.
0.051e-20101TaAffx.25555.1.S1_s_atAJ614172--2e-1At1g01720ATAF1C.G.S.X.
0.051e-20101TaAffx.25555.1.S1_atAJ614172--2e-1At1g01720ATAF1C.G.S.X.
0.059e-1891Ta.1823.1.A1_atCK194264--7e-7At3g60910catalytic/ methyltransferaseC.G.S.X.
0.046e-1685TaAffx.761.1.S1_atBF199757--1e-9At5g01160e-cadherin binding protein-relatedC.G.S.X.
0.056e-1685Ta.10499.1.S1_x_atBQ166060--7e+0At5g12340unknown proteinC.G.S.X.
0.046e-1685Ta.10162.1.S1_atCD453460--8e-7At2g33800ribosomal protein S5 family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e+034Arabidopsis thalianaAt3g53530824521heavy-metal-associated domain-containing proteinF:metal ion binding;P:metal ion transport;C:unknown;PM---C.G.S.X.
0.044e-240Glycine maxPsAffx.C205000003_atPsAffx.C205000003--9e-1At5g20270HHP1 (HEPTAHELICAL TRANSMEMBRANE PROTEIN1)C.G.S.X.
0.525e-98357Hordeum vulgareContig14134_atContig14134--2e+0At2g32050cell cycle control protein-relatedC.G.S.X.
0.209e-35149Oryza sativaOs08g0113700AK070327.1-Conserved hypothetical protein4e-3At5g27440unknown proteinC.G.S.X.
0.041e-242Populus trichocarpaPtpAffx.218717.1.S1_atpmrna34439--7e-1At4g0081060S acidic ribosomal protein P1 (RPP1B)C.G.S.X.
0.031e-136Vitis vinifera1606669_s_atCF568908aquaporin-like-1e-18At2g39010PIP2E (PLASMA MEMBRANE INTRINSIC PROTEIN 2E)C.G.S.X.
0.048e-444Zea maysZm.4600.1.A1_atBM078673auxin-inducible protein-2e-1At4g14870P-P-bond-hydrolysis-driven protein transmembrane transporterC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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