Gene omics information

Query gene ID TaAffx.12950.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8894.4TaAffx.12950.1.S1_atBJ228090--4e-3At4g24275-S.X.H.G.
0.5475.5Ta.5254.1.S1_atBJ219348--2e-15At4g30220RUXF (SMALL NUCLEAR RIBONUCLEOPROTEIN F)S.X.H.G.
0.5072.4Ta.3695.1.S1_atCA741986--5e-1At3g51100unknown proteinS.X.H.G.
0.4767.9Ta.2299.1.S1_atCK157281--4e-11At3g07590small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putativeS.X.H.G.
0.4464.5TaAffx.16093.1.A1_atBQ168677--3e+0At5g12330LRP1 (LATERAL ROOT PRIMORDIUM 1)S.X.H.G.
0.4464.5Ta.22275.1.S1_atCA735269--2e+0At5g36140CYP716A2S.X.H.G.
0.4464.5Ta.2299.3.S1_a_atCA672009--4e+0At2g42220rhodanese-like domain-containing proteinS.X.H.G.
0.4159.6Ta.3136.1.S1_atCF134067--2e-16At1g63660GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase, putativeS.X.H.G.
0.4058.4Ta.27898.1.S1_atCD886940--1e+0Atmg00030-S.X.H.G.
0.4058.4Ta.6713.1.S1_atCK204213--5e-5At3g20000TOM40S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.798.7GSM139918Anther leptotene-pachytene rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.298.1GSM139917Anther leptotene-pachytene rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.098.0GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
5.397.6GSM139914Anther pre-meiosis rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.097.4GSM139920Anther diplotene-anaphaseI rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.596.9GSM139922Anther telophaseI-telophaseII rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.396.7GSM298072Crown tissue of Paragon at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
4.296.6GSM314257tissue type: germinating seed, embryo - rep1GSE12508Transcription patterns during wheat development
4.296.6GSM298059Crown tissue of Harnesk at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
4.096.3GSM139921Anther diplotene-anaphaseI rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.065e-342Ta.30734.2.A1_atCA683447--1e+0At5g60370unknown proteinC.G.S.X.
0.042e-240TaAffx.38265.4.S1_atBJ246936--1e+0At1g30800-C.G.S.X.
0.032e-240TaAffx.37250.1.S1_atBJ297079--1e-1At3g25100CDC45 (cell division cycle 45)C.G.S.X.
0.042e-240TaAffx.120052.1.S1_atBJ246314--3e-1At2g36480zinc finger (C2H2-type) family proteinC.G.S.X.
0.032e-240Ta.9650.1.A1_atCD900417--6e+0At4g06490unknown proteinC.G.S.X.
0.022e-240Ta.9364.1.A1_atCD931133--2e-1At3g53310transcriptional factor B3 family proteinC.G.S.X.
0.022e-240Ta.8331.1.S1_atCD913110--7e-1At3g52710unknown proteinC.G.S.X.
0.042e-240Ta.7157.1.A1_x_atBJ321770--2e-1At2g24140unknown proteinC.G.S.X.
0.022e-240Ta.7037.1.S1_atBJ320632--3e+0At3g62300agenet domain-containing proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.064e-342Arabidopsis thalianaAt4g24275828530-Identified as a screen for stress-responsive genes.---C.G.S.X.
0.043e-240Glycine maxGmaAffx.1912.1.A1_atBU761863--3e-1At2g29125RTFL2 (ROTUNDIFOLIA LIKE 2)C.G.S.X.
0.507e-53206Hordeum vulgareContig16899_atContig16899--6e+0At3g46666unknown proteinC.G.S.X.
0.061e-448Oryza sativaOs03g0668900AK108369.1-Conserved hypothetical protein6e-1At3g16770ATEBP (ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN)C.G.S.X.
0.043e-240Populus trichocarpaPtpAffx.209933.1.S1_atpmrna19592hypothetical protein-7e-1At5g57570-C.G.S.X.
0.056e-650Vitis vinifera1614133_atCD711415hypothetical protein LOC100255873-5e-2At1g43800acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putativeC.G.S.X.
0.042e-342Zea maysZm.10409.1.A1_atBQ539201--2e+0At3g23165LCR42 (Low-molecular-weight cysteine-rich 42)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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