CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID TaAffx.129082.1.S1_x_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.83 93.4 TaAffx.129082.1.S1_x_at CK154420 - - 3e-6 At5g64460 - S.X. H.G.
0.67 86.3 Ta.25619.2.S1_a_at CA609960 - - 1e+0 At2g14160 nucleic acid binding / nucleotide binding S.X. H.G.
0.38 54.7 Ta.3909.1.A1_x_at BJ274929 - - 8e-1 At3g01400 armadillo/beta-catenin repeat family protein S.X. H.G.
0.33 46.9 TaAffx.24368.1.S1_x_at CA720312 - - 1e+1 At5g55507 hydroxyproline-rich glycoprotein family protein S.X. H.G.
0.32 44.4 Ta.8149.1.A1_x_at CK205375 - - 7e-35 At4g14240 - S.X. H.G.
0.23 29.0 TaAffx.39330.1.A1_at BG909016 - - 3e+0 At3g28950 avirulence-responsive protein-related / avirulence induced gene (AIG) protein-related S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
9.0 99.0 GSM298070 Leaf tissue of Paragon at 9 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
7.8 98.7 GSM298076 Crown tissue of Paragon at 9 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
6.3 98.2 GSM298078 Leaf tissue of Solstice at 3 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
6.2 98.1 GSM298065 Leaf tissue of Paragon at 3 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
5.3 97.6 GSM298069 Leaf tissue of Paragon at 9 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
4.6 97.0 GSM298058 Leaf tissue of Harnesk at 9 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
4.3 96.7 GSM298082 Leaf tissue of Solstice at 9 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
4.3 96.7 GSM298079 Leaf tissue of Solstice at 5 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
4.3 96.7 GSM298068 Leaf tissue of Paragon at 5 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
4.2 96.6 GSM298077 Leaf tissue of Solstice at 3 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.50 6e-162 571 Ta.9338.1.S1_at CK156892 - - 5e-8 At1g58280 - C.G. S.X.
0.42 2e-130 466 Ta.18783.1.A1_at CK167509 - - 8e-2 At5g64460 - C.G. S.X.
0.42 5e-107 389 Ta.4424.2.A1_x_at BJ246603 - - 2e-5 At5g64460 - C.G. S.X.
0.29 5e-79 295 TaAffx.129082.2.S1_at CA610797 - - 4e-3 At1g58280 - C.G. S.X.
0.34 4e-64 246 TaAffx.98966.1.S1_at CA631776 - - 2e-2 At5g64460 - C.G. S.X.
0.41 7e-63 242 Ta.9338.2.S1_x_at CA614952 - - 4e-2 At1g58280 - C.G. S.X.
0.20 9e-50 198 Ta.4424.1.A1_x_at CK205365 - - 2e+0 At1g69720 ho3 (HEME OXYGENASE 3) C.G. S.X.
0.17 2e-41 171 Ta.9338.3.S1_x_at CA593592 - - 3e-7 At5g64460 - C.G. S.X.
0.17 2e-41 171 Ta.9338.3.S1_at CA593592 - - 3e-7 At5g64460 - C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 3e-6 54 Arabidopsis thaliana At5g64460 836567 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;FOPBM - - - C.G. S.X.
0.04 2e-2 42 Glycine max GmaAffx.57637.1.S1_at AI736711 - - 4e+0 At5g25640 - C.G. S.X.
0.68 0 862 Hordeum vulgare Contig5133_s_at Contig5133 - - 4e-5 At1g58280 - C.G. S.X.
0.35 3e-54 214 Oryza sativa Os04g0102500 CR292872 - Phosphoglycerate mutase-like protein 3e-6 At5g64460 - C.G. S.X.
0.03 2e-5 52 Populus trichocarpa PtpAffx.212916.1.S1_at pmrna25270 hypothetical protein - 1e-22 At5g23680 sterile alpha motif (SAM) domain-containing protein C.G. S.X.
0.03 2e-1 36 Vitis vinifera 1608530_at CB971070 hypothetical protein LOC100265997 - 2e-4 At5g64460 - C.G. S.X.
0.31 4e-50 198 Zea mays Zm.3850.1.A1_at AI619409 phosphoglycerate mutase-like protein - 2e-10 At5g64460 - C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage