Gene omics information

Query gene ID TaAffx.128896.20.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9498.9TaAffx.128896.20.S1_atCA683652--6e-36Atcg00790-S.X.H.G.
0.4666.8TaAffx.112971.1.S1_atCA618509--3e-1At5g54400methyltransferaseS.X.H.G.
0.3956.1TaAffx.29234.1.S1_x_atCA647550--7e-1At5g11920AtcwINV6 (6-&1-fructan exohydrolase)S.X.H.G.
0.3448.1TaAffx.54631.1.S1_atCA679018--2e-2At1g05300ZIP5S.X.H.G.
0.3448.1TaAffx.129222.6.S1_atBJ275924--8e-1At5g14750ATMYB66 (MYB DOMAIN PROTEIN 66)S.X.H.G.
0.3142.7TaAffx.7150.1.S1_atCA667568--4e+0At5g61270PIF7 (PHYTOCHROME-INTERACTING FACTOR7)S.X.H.G.
0.3040.9TaAffx.30005.1.S1_atCA630801--1e+0At4g00840zinc ion bindingS.X.H.G.
0.2735.6TaAffx.51913.1.S1_x_atCA716536--8e-1At5g56110ATMYB103 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 103)S.X.H.G.
0.2633.6TaAffx.59629.1.S1_atCA597893--8e-1At1g22980unknown proteinS.X.H.G.
0.2633.6TaAffx.84515.1.S1_atCA635080--4e+0At4g24230ACBP3 (ACYL-COA-BINDING DOMAIN 3)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
42.299.9GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
29.299.8GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
27.399.8GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
22.599.8GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
21.699.7GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
16.699.6GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
12.199.4GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
9.299.0GSM298078Leaf tissue of Solstice at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
8.298.8GSM298065Leaf tissue of Paragon at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
6.998.4GSM324494Si+ B+ rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.000934TaAffx.128896.20.S1_s_atCA683652--6e-36Atcg00790-C.G.S.X.
0.225e-154543TaAffx.128896.1.S1_s_atCD891469--2e-49Atcg00780-C.G.S.X.
0.384e-68258TaAffx.128896.15.S1_s_atCA677411--2e-48Atcg00790-C.G.S.X.
0.214e-40165TaAffx.128896.6.A1_atCA739307--8e-26Atcg00780-C.G.S.X.
0.063e-756TaAffx.108309.1.S1_x_atCA689798--1e+1At5g53830VQ motif-containing proteinC.G.S.X.
0.063e-756TaAffx.108309.1.S1_atCA689798--1e+1At5g53830VQ motif-containing proteinC.G.S.X.
0.055e-652TaAffx.86658.1.S1_atCA603600--4e+0At5g65040senescence-associated protein-relatedC.G.S.X.
0.055e-652TaAffx.6191.1.S1_atCA690237--4e+0At5g11412nucleic acid binding / nucleotide bindingC.G.S.X.
0.055e-652TaAffx.54250.1.S1_atCA683969--9e-1At1g27280paired amphipathic helix repeat-containing proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.386e-36151Arabidopsis thalianaAtcg00790--chloroplast gene encoding a ribosomal protein L16, which is a constituent of 50S large ribosomal subunit---C.G.S.X.
0.125e-31135Glycine maxGma.10842.1.S1_s_atCA851794--5e-107Atcg00790-C.G.S.X.
0.481e-161567Hordeum vulgareContig11738_atContig11738--5e-63Atcg00780-C.G.S.X.
0.575e-115414Oryza sativaOsAffx.32337.1.A1_at---0C.G.S.X.
0.306e-43174Populus trichocarpaPtp.6512.1.S1_s_atCK112728--2e-92Atcg00790-C.G.S.X.
0.101e-55214Vitis vinifera1622010_atCF207538similar to RNA polymerase alpha subunit-0Atcg00740-C.G.S.X.
0.582e-132470Zea maysZmAffx.1521.1.S1_at11990232-58--1e-70Atcg00790-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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