Gene omics information

Query gene ID	TaAffx.128772.1.S1_x_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.56	78.6	TaAffx.128772.1.S1_x_at	BG605353	-	-	2e+0	At2g44740	CYCP4	S.X.	H.G.	Please select
0.46	66.8	TaAffx.128772.1.S1_at	BG605353	-	-	2e+0	At2g44740	CYCP4	S.X.	H.G.	Please select
0.02	3.6	TaAffx.130713.1.A1_at	CA662715	-	-	1e-6	At2g23790	unknown protein	S.X.	H.G.	Please select
0.01	2.4	TaAffx.100660.1.S1_at	BJ305738	-	-	2e+0	At2g45770	CPFTSY	S.X.	H.G.	Please select
0.00	0.7	Ta.5541.1.S1_at	CD373605	-	-	1e+0	At1g07900	LBD1 (LOB DOMAIN-CONTAINING PROTEIN 1)	S.X.	H.G.	Please select
0.00	0.7	TaAffx.118633.1.S1_at	AW448377	-	-	3e-9	At2g20300	ALE2 (Abnormal Leaf Shape 2)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
13.9	99.5	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.7	98.4	GSM111212	genotype DH91 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
6.3	98.2	GSM138199	genotype C22 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
6.2	98.1	GSM111185	genotype C22 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
6.0	98.0	GSM138169	genotype B68 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
5.9	98.0	GSM138153	genotype G32 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
5.8	97.9	GSM138188	genotype F38a developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
5.0	97.4	GSM111225	genotype A81 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
4.8	97.2	GSM111187	genotype B68 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
4.8	97.2	GSM111237	genotype F38b developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.96	0	1184	TaAffx.128772.1.S1_at	BG605353	-	-	2e+0	At2g44740	CYCP4	C.G.	S.X.	Please select
0.15	7e-44	178	TaAffx.142395.1.S1_x_at	CA736419	-	-	2e+0	At3g55900	F-box family protein	C.G.	S.X.	Please select
0.02	6e-1	36	TaAffx.32443.1.S1_at	CA594982	-	-	4e+0	At5g55570	unknown protein	C.G.	S.X.	Please select
0.01	3e+0	34	TaAffx.94076.1.S1_at	CA729082	-	-	7e+0	At5g13850	NACA3 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3)	C.G.	S.X.	Please select
0.02	3e+0	34	TaAffx.93099.1.S1_at	BJ232083	-	-	9e-1	At5g39470	F-box family protein	C.G.	S.X.	Please select
0.02	3e+0	34	TaAffx.16098.1.A1_at	BQ168627	-	-	1e+0	At2g01464		C.G.	S.X.	Please select
0.02	3e+0	34	Ta.5091.1.A1_at	BQ839196	-	-	2e+0	At3g22820	allergen-related	C.G.	S.X.	Please select
0.02	3e+0	34	Ta.5091.1.A1_a_at	BQ839196	-	-	2e+0	At3g22820	allergen-related	C.G.	S.X.	Please select
0.01	3e+0	34	Ta.4014.2.S1_at	CK162579	-	-	1e-16	At5g51070	ERD1 (EARLY RESPONSIVE TO DEHYDRATION 1)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	2e+0	34	Arabidopsis thaliana	At2g44740	819082	CYCP4	F:cyclin-dependent protein kinase activity;P:regulation of cell cycle;C:unknown;FOMPB	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	3e+0	34	Glycine max	GmaAffx.24721.1.S1_at	CA799384	-	-	2e-1	At2g16740	UBC29 (ubiquitin-conjugating enzyme 29)	C.G.	S.X.	Please select
0.02	1e+0	34	Hordeum vulgare	HVSMEk0017B16r2_at	HVSMEk0017B16r2	-	-	1e+0	At2g26160	-	C.G.	S.X.	Please select
0.06	1e-12	75	Oryza sativa	Os06g0192300	9634.m00877	-	-	3e-1	At1g64340	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.02	3e+0	34	Populus trichocarpa	PtpAffx.205449.1.S1_at	pmrna10776	hypothetical protein	-	6e-2	At5g26673	-	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.02	7e-1	34	Vitis vinifera	1612391_at	CF517423	hypothetical protein LOC100266034	-	2e-1	At4g14815	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	C.G.	S.X.	Please select
0.02	2e+1	30	Zea mays	ZmAffx.1010.1.A1_at	AI881417	-	-	2e-1	At2g45250	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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