Gene omics information

Query gene ID	TaAffx.128418.127.A1_x_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.71	88.0	TaAffx.128418.127.A1_x_at	CA730835	-	-	1e+0	At2g15830	unknown protein	S.X.	H.G.	Please select
0.50	72.4	TaAffx.43432.1.S1_at	CA612748	-	-	9e+0	At5g30495	-	S.X.	H.G.	Please select
0.38	54.7	TaAffx.110263.1.S1_at	CA661150	-	-	1e+0	At2g28740	HIS4	S.X.	H.G.	Please select
0.35	49.8	TaAffx.111405.1.S1_at	CA698977	-	-	1e+0	At1g62000	unknown protein	S.X.	H.G.	Please select
0.29	39.2	TaAffx.111583.1.S1_x_at	CA637262	-	-	1e+1	At5g02440	unknown protein	S.X.	H.G.	Please select
0.29	39.2	TaAffx.112158.1.S1_x_at	CA626538	-	-	2e+1	At3g28590	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
17.2	99.6	GSM298073	Crown tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
13.1	99.4	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
5.8	97.9	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.7	97.1	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.6	97.0	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.5	96.9	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.4	96.8	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.2	96.6	GSM298094	Crown tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.9	96.1	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.9	96.1	GSM298075	Crown tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.43	3e-124	444	Ta.28507.2.S1_at	CA697634	-	-	1e+0	At5g47870	unknown protein	C.G.	S.X.	Please select
0.45	7e-79	293	Ta.28507.1.S1_at	BJ232462	-	-	1e+0	At4g00430	PIP1	C.G.	S.X.	Please select
0.41	2e-76	286	Ta.6903.1.S1_at	BJ312137	-	-	4e+0	At5g13850	NACA3 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3)	C.G.	S.X.	Please select
0.38	2e-70	266	Ta.9811.1.S1_at	BJ238064	-	-	1e+0	At2g15830	unknown protein	C.G.	S.X.	Please select
0.31	1e-68	260	Ta.20219.1.S1_at	CA630971	-	-	4e+0	At4g25630	FIB2 (FIBRILLARIN 2)	C.G.	S.X.	Please select
0.30	1e-55	216	Ta.24577.1.A1_at	BJ322344	-	-	1e+0	At2g15830	unknown protein	C.G.	S.X.	Please select
0.29	6e-55	214	Ta.2977.2.S1_s_at	BJ216153	-	-	1e+0	At1g15215	-	C.G.	S.X.	Please select
0.30	1e-52	206	Ta.9759.1.A1_at	BJ230239	-	-	7e-2	At3g63350	AT-HSFA7B	C.G.	S.X.	Please select
0.26	1e-52	206	Ta.24611.1.S1_at	BJ315951	-	-	1e+0	At5g17150	-	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	1e+0	34	Arabidopsis thaliana	At2g15830	816079	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	2e+0	34	Glycine max	GmaAffx.77097.1.S1_at	BG237643	-	-	2e+0	At5g15040	paired amphipathic helix repeat-containing protein	C.G.	S.X.	Please select
0.23	1e-17	89	Hordeum vulgare	HF11C23r_at	HF11C23r	-	-	1e+0	At1g64940	CYP89A6	C.G.	S.X.	Please select
0.03	1e-1	38	Oryza sativa	OsAffx.19175.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	2e+0	34	Populus trichocarpa	PtpAffx.43184.3.A1_a_at	CV240108	nadph-cytochrome P450 oxydoreductase	-	7e-11	At4g24520	ATR1 (ARABIDOPSIS P450 REDUCTASE 1)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	1e+0	32	Vitis vinifera	1610999_at	BQ800504	-	-	4e+0	At4g01960	unknown protein	C.G.	S.X.	Please select
0.03	2e+0	32	Zea mays	Zm.7787.1.A1_at	BM349610	hypothetical protein LOC100277620	-	5e+0	At1g04000	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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