Gene omics information

Query gene ID TaAffx.122624.2.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7188.0TaAffx.122624.2.S1_atBG909421--1e-21At3g54190-S.X.H.G.
0.5072.4TaAffx.122624.2.S1_s_atBG909421--1e-21At3g54190-S.X.H.G.
0.1618.2TaAffx.23800.1.S1_atCA730244--1e+0At2g26530AR781S.X.H.G.
0.1415.8Ta.9125.3.S1_a_atBJ317666--4e+0At3g0256040S ribosomal protein S7 (RPS7B)S.X.H.G.
0.078.6TaAffx.94517.1.S1_atBJ243990--4e-2At1g75550glycine-rich proteinS.X.H.G.
0.078.6Ta.10722.1.S1_atBQ166409--1e-5At1g61010CPSF73-I (CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 73-I)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
14.099.5GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
6.698.3GSM111187genotype B68 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
6.398.2GSM298083Crown tissue of Solstice at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
5.497.7GSM298061Crown tissue of Harnesk at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
5.497.7GSM111209genotype F36 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
5.297.5GSM298059Crown tissue of Harnesk at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
5.297.5GSM298087Crown tissue of Solstice at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
5.197.5GSM111182genotype A40 developing seed at 5 days after anthesis, biological rep1GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
5.097.4GSM111251genotype A35 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
4.897.2GSM298060Crown tissue of Harnesk at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.000860TaAffx.122624.2.S1_s_atBG909421--1e-21At3g54190-C.G.S.X.
0.483e-148523TaAffx.122624.1.S1_atCD885407--6e-9At3g54190-C.G.S.X.
0.076e-857Ta.7270.1.S1_atBT009258.1--5e-24At2g38630-C.G.S.X.
0.011e-240Ta.27659.1.S1_atBT009129.1--0At1g07940elongation factor 1-alpha / EF-1-alphaC.G.S.X.
0.046e-238TaAffx.54359.1.S1_atCA682571--5e-15At5g50000protein kinase, putativeC.G.S.X.
0.046e-238TaAffx.29087.1.S1_atCA650580--1e+0At1g34520long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family proteinC.G.S.X.
0.046e-238TaAffx.25489.1.S1_atCA699320--4e+0At2g44340VQ motif-containing proteinC.G.S.X.
0.036e-238TaAffx.11086.1.S1_atBE405184--3e-1At5g63050EMB2759 (embryo defective 2759)C.G.S.X.
0.046e-238TaAffx.108764.1.S1_atCA684408--2e+1At5g14680universal stress protein (USP) family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.211e-21103Arabidopsis thalianaAt3g54190824586-F:molecular_function unknown;P:biological_process unknown;C:unknown;PO---C.G.S.X.
0.135e-342Glycine maxGmaAffx.91578.1.S1_s_atCF807303--6e-74At3g54190-C.G.S.X.
0.243e-76284Hordeum vulgareContig3161_atContig3161--3e-19At3g54190-C.G.S.X.
0.282e-108393Oryza sativaOs01g0817800AK073827.1-WD40-like domain containing protein1e-18At3g54190-C.G.S.X.
0.179e-1477Populus trichocarpaPtpAffx.28581.1.S1_atBU896074hypothetical protein-8e-152At3g54190-C.G.S.X.
0.042e-238Vitis vinifera1617264_atCB004861--1e+0At4g13830J20 (DNAJ-LIKE 20)C.G.S.X.
0.102e-652Zea maysZm.3436.1.A1_atAI964659hypothetical protein LOC100217002-1e-20At3g54190-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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