CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID TaAffx.122452.1.A1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 86.3 TaAffx.122452.1.A1_at BE515764 - - 4e+0 At1g68880 AtbZIP (Arabidopsis thaliana basic leucine-zipper 8) S.X. H.G.
0.71 88.0 Ta.27783.1.S1_at BQ237765 - - 2e-19 At4g15415 ATB' GAMMA S.X. H.G.
0.71 88.0 Ta.8457.2.A1_at BQ161925 - - 1e+1 At4g00220 JLO (JAGGED LATERAL ORGANS) S.X. H.G.
0.59 79.8 TaAffx.11930.1.S1_s_at CA639901 - - 3e-5 At2g30330 GCN5L1 family protein S.X. H.G.
0.56 78.6 Ta.3348.1.S1_a_at BJ314622 - - 3e-52 At1g14400 UBC1 (UBIQUITIN CARRIER PROTEIN 1) S.X. H.G.
0.46 66.8 Ta.8457.1.A1_at BE430699 - - 6e+0 At2g20619 - S.X. H.G.
0.44 64.5 Ta.13995.1.S1_at CK195574 - - 1e-3 At5g56190 WD-40 repeat family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
6.0 98.0 GSM139931 Anther maturea nthers rep1 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.4 97.7 GSM314280 tissue type: anthers, before anthesis - rep3 GSE12508 Transcription patterns during wheat development
5.0 97.4 GSM314279 tissue type: anthers, before anthesis - rep2 GSE12508 Transcription patterns during wheat development
4.4 96.8 GSM250900 TcLr34_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.2 96.6 GSM314276 tissue type: pistil, before anthesis - rep2 GSE12508 Transcription patterns during wheat development
4.1 96.4 GSM314277 tissue type: pistil, before anthesis - rep3 GSE12508 Transcription patterns during wheat development
4.1 96.4 GSM143496 Jupateco_Lr34 (susceptible), mock inoculated basal leaf, replication 1 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.0 96.3 GSM314275 tissue type: pistil, before anthesis - rep1 GSE12508 Transcription patterns during wheat development
3.9 96.1 GSM143499 Jupateco_Lr34 (susceptible), mock inoculated distal leaf, replication 1 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
3.8 96.0 GSM314278 tissue type: anthers, before anthesis - rep1 GSE12508 Transcription patterns during wheat development
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.36 2e-66 252 Ta.9037.1.S1_at CD454949 - - 6e-1 At5g51680 hydroxyproline-rich glycoprotein family protein C.G. S.X.
0.04 6e-2 38 Ta.9081.2.S1_a_at BJ292126 - - 2e+1 At5g36900 unknown protein C.G. S.X.
0.03 4e+0 32 TaAffx.57788.1.S1_at CA627016 - - 2e+1 At5g18970 AWPM-19-like membrane family protein C.G. S.X.
0.03 1e+1 30 TaAffx.98026.1.A1_at BQ482922 - - 3e-1 At2g19830 SNF7.2 C.G. S.X.
0.01 1e+1 30 TaAffx.98212.1.S1_at BQ168641 - - 9e-16 At1g14970 unknown protein C.G. S.X.
0.03 1e+1 30 TaAffx.9363.1.S1_at CA600590 - - 1e+0 At2g45440 DHDPS2 (DIHYDRODIPICOLINATE SYNTHASE) C.G. S.X.
0.03 1e+1 30 TaAffx.85307.1.S1_at CA616740 - - 4e+0 At5g14345 copper ion binding / electron carrier C.G. S.X.
0.03 1e+1 30 TaAffx.78045.1.S1_at CA737852 - - 6e-2 At4g00840 zinc ion binding C.G. S.X.
0.03 1e+1 30 TaAffx.7704.1.S1_at CA652770 - - 2e+1 At5g39880 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 4e+0 32 Arabidopsis thaliana At1g68880 843221 AtbZIP (Arabidopsis thaliana basic leucine-zipper 8) F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus, chloroplast;PMFO - - - C.G. S.X.
0.06 3e-1 36 Glycine max Gma.6247.1.A1_at BQ611371 - - 3e+0 At3g49870 ATARLA1C (ADP-ribosylation factor-like A1C) C.G. S.X.
0.04 1e-1 36 Hordeum vulgare Contig10749_at Contig10749 - - 5e+0 At2g47130 short-chain dehydrogenase/reductase (SDR) family protein C.G. S.X.
0.12 4e-1 36 Oryza sativa Os06g0311300 CA760158 - Seven in absentia protein family protein 4e-3 At3g07080 membrane protein C.G. S.X.
0.04 1e+0 34 Populus trichocarpa PtpAffx.24432.1.A1_at CV260018 hypothetical protein - 3e+0 At3g30530 ATBZIP42 (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 42) C.G. S.X.
0.03 4e+0 30 Vitis vinifera 1617159_at CD797901 hypothetical protein LOC100242747 - 2e-1 At2g03780 translin family protein C.G. S.X.
0.04 6e+0 30 Zea mays Zm.9580.2.S1_at AI734597 - - 2e+0 At2g31305 INH3 (INHIBITOR-3) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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