Gene omics information

Query gene ID	TaAffx.12159.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.39	56.1	TaAffx.12159.1.S1_at	BJ286382	-	-	8e-2	At5g17050	UGT78D2 (UDP-GLUCOSYL TRANSFERASE 78D2)	S.X.	H.G.	Please select
0.73	89.1	Ta.5346.1.A1_at	CA615734	-	-	1e+0	At1g54200	unknown protein	S.X.	H.G.	Please select
0.73	89.1	Ta.5346.2.S1_x_at	CA647901	-	-	1e-1	At1g28650	lipase, putative	S.X.	H.G.	Please select
0.44	64.5	Ta.23376.1.S1_at	CK164052	-	-	1e-2	At3g01190	peroxidase 27 (PER27) (P27) (PRXR7)	S.X.	H.G.	Please select
0.43	62.2	Ta.5346.3.A1_x_at	CA645914	-	-	9e-2	At1g28650	lipase, putative	S.X.	H.G.	Please select
0.40	58.4	Ta.23376.2.S1_s_at	CA603621	-	-	1e+0	At5g24490	30S ribosomal protein, putative	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
46.7	99.9	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
34.5	99.9	GSM314255	tissue type: germinating seed, root - rep2	GSE12508	Transcription patterns during wheat development
30.0	99.8	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development
20.4	99.7	GSM314254	tissue type: germinating seed, root - rep1	GSE12508	Transcription patterns during wheat development
17.1	99.6	GSM314280	tissue type: anthers, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
14.9	99.5	GSM314260	tissue type: seedling, root - rep1	GSE12508	Transcription patterns during wheat development
13.5	99.5	GSM314278	tissue type: anthers, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
11.6	99.3	GSM314279	tissue type: anthers, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
7.1	98.5	GSM314256	tissue type: germinating seed, root - rep3	GSE12508	Transcription patterns during wheat development
7.1	98.5	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.37	3e-41	169	TaAffx.99042.1.A1_at	CK211682	-	-	1e+0	At1g75190	unknown protein	C.G.	S.X.	Please select
0.16	2e-9	63	TaAffx.93119.1.A1_at	BJ230352	-	-	2e-2	At1g50470	-	C.G.	S.X.	Please select
0.13	9e-8	57	Ta.3188.1.S1_at	BJ224910	-	-	7e-2	At1g50470	-	C.G.	S.X.	Please select
0.06	9e-5	48	TaAffx.93151.1.A1_at	BJ228434	-	-	4e-3	At4g36770	UDP-glycosyltransferase/ transferase, transferring glycosyl groups	C.G.	S.X.	Please select
0.05	1e-3	44	TaAffx.8459.1.S1_at	CA625114	-	-	2e-1	At1g22360	AtUGT85A2 (UDP-glucosyl transferase 85A2)	C.G.	S.X.	Please select
0.04	2e-2	40	TaAffx.58342.1.S1_at	CA620385	-	-	4e+0	At1g30972	-	C.G.	S.X.	Please select
0.06	2e-2	40	TaAffx.119381.1.A1_at	BJ275225	-	-	2e-5	At5g17050	UGT78D2 (UDP-GLUCOSYL TRANSFERASE 78D2)	C.G.	S.X.	Please select
0.02	2e-2	40	Ta.27428.1.S1_at	CD866447	-	-	3e-4	At4g23030	MATE efflux protein-related	C.G.	S.X.	Please select
0.11	2e-2	40	Ta.22120.1.S1_at	CA724491	-	-	1e+0	At1g54240	DNA binding	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	8e-2	38	Arabidopsis thaliana	At5g17050	831568	UGT78D2 (UDP-GLUCOSYL TRANSFERASE 78D2)	The At5g17050 encodes a anthocyanidin 3-O-glucosyltransferase which specifically glucosylates the 3-position of the flavonoid C-ring. Anthocyanidins such as cyanidin and pelargonidin as well as flavonols such as kaempferol and quercetin are accepted substrates.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.05	3e-2	40	Glycine max	GmaAffx.1999.1.S1_at	CA783247	-	-	2e-11	At1g10400	UDP-glycosyltransferase/ transferase, transferring glycosyl groups	C.G.	S.X.	Please select
0.07	2e-10	65	Hordeum vulgare	HVSMEb0008M09r2_at	HVSMEb0008M09r2	-	-	1e-6	At5g17050	UGT78D2 (UDP-GLUCOSYL TRANSFERASE 78D2)	C.G.	S.X.	Please select
0.25	3e-15	83	Oryza sativa	OsAffx.11989.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	2e+0	34	Populus trichocarpa	PtpAffx.201719.1.S1_at	pmrna3413	hypothetical protein	-	1e+0	At3g30730	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.05	2e-2	38	Vitis vinifera	1611320_at	CF206248.1	hypothetical protein LOC100268157	-	2e-8	At3g16520	UDP-glucoronosyl/UDP-glucosyl transferase family protein	C.G.	S.X.	Please select
0.02	2e-6	52	Zea mays	Zm.5382.1.A1_at	CO519926	Hypothetical protein LOC100192877	-	9e-1	At1g73000	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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