Gene omics information

Query gene ID	TaAffx.120957.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.38	54.7	TaAffx.120957.1.S1_at	CF133813	-	-	4e-1	At5g37380	DNAJ heat shock N-terminal domain-containing protein	S.X.	H.G.	Please select
0.67	86.3	Ta.6916.2.S1_a_at	BJ299062	-	-	4e+0	At4g24204	protein binding / zinc ion binding	S.X.	H.G.	Please select
0.67	86.3	TaAffx.114829.1.S1_at	CA734325	-	-	1e+0	At5g38895	zinc finger (C3HC4-type RING finger) family protein	S.X.	H.G.	Please select
0.57	79.2	TaAffx.59305.1.S1_at	CA640324	-	-	4e-4	At4g36270	ATP binding	S.X.	H.G.	Please select
0.56	78.6	TaAffx.119574.2.S1_s_at	CA604787	-	-	7e-2	At3g56580	zinc finger (C3HC4-type RING finger) family protein	S.X.	H.G.	Please select
0.55	76.8	TaAffx.119574.1.S1_at	BJ267748	-	-	2e+0	At1g69010	BIM2 (BES1-interacting Myc-like protein 2)	S.X.	H.G.	Please select
0.48	69.0	TaAffx.114008.1.S1_at	CD938284	-	-	3e-1	At2g17950	WUS (WUSCHEL)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
10.7	99.2	GSM298087	Crown tissue of Solstice at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
7.7	98.7	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
7.4	98.6	GSM298083	Crown tissue of Solstice at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
6.4	98.2	GSM298086	Crown tissue of Solstice at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
6.3	98.2	GSM314277	tissue type: pistil, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
5.9	98.0	GSM298084	Crown tissue of Solstice at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.7	97.9	GSM314274	tissue type: floral bracts, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
5.4	97.7	GSM298085	Crown tissue of Solstice at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.1	97.5	GSM298088	Crown tissue of Solstice at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.9	97.3	GSM314272	tissue type: floral bracts, before anthesis - rep1	GSE12508	Transcription patterns during wheat development

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.09	2e-3	44	TaAffx.118709.1.S1_at	BJ313044	-	-	7e-8	At5g37750	heat shock protein binding / unfolded protein binding	C.G.	S.X.	Please select
0.03	1e-1	38	Ta.28699.1.S1_x_at	BQ838158	-	-	6e-7	At4g27090	60S ribosomal protein L14 (RPL14B)	C.G.	S.X.	Please select
0.03	4e-1	36	TaAffx.128712.8.S1_at	BJ221055	Photosystem II CP43 chlorophyll apoprotein	-	9e-45	Atcg00280	-	C.G.	S.X.	Please select
0.03	2e+0	34	TaAffx.85669.1.S1_at	CA620714	-	-	7e-2	At5g43840	AT-HSFA6A	C.G.	S.X.	Please select
0.03	2e+0	34	TaAffx.80075.1.S1_at	CA703103	-	-	4e+0	At5g66380	ATFOLT1 (ARABIDOPSIS THALIANA FOLATE TRANSPORTER 1)	C.G.	S.X.	Please select
0.03	6e+0	32	TaAffx.87044.1.S1_at	CA596757	-	-	7e-5	At5g64870	-	C.G.	S.X.	Please select
0.03	6e+0	32	TaAffx.86728.1.S1_at	CA601835	-	-	3e-1	At5g17480	APC1 (ARABIDOPSIS POLLEN CALCIUM-BINDING PROTEIN 1)	C.G.	S.X.	Please select
0.03	6e+0	32	TaAffx.23475.1.S1_at	CA734769	-	-	1e+1	At3g58910	F-box family protein	C.G.	S.X.	Please select
0.02	6e+0	32	TaAffx.108285.1.S1_at	CA659617	-	-	5e+0	At1g22690	gibberellin-responsive protein, putative	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	4e-1	36	Arabidopsis thaliana	At5g37380	833712	DNAJ heat shock N-terminal domain-containing protein	F:unfolded protein binding, heat shock protein binding;P:protein folding;C:unknown;BOMFPAV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	5e-1	36	Glycine max	GmaAffx.48752.1.S1_at	AW755624	-	-	8e-1	At2g15440	unknown protein	C.G.	S.X.	Please select
0.04	3e+0	32	Hordeum vulgare	HVSMEb0003K10r2_x_at	HVSMEb0003K10r2	-	-	2e-2	At2g29870	major intrinsic family protein / MIP family protein	C.G.	S.X.	Please select
0.12	1e-30	135	Oryza sativa	Os02g0510000	AK100659.1	-	Chaperone protein dnaJ	4e-1	At1g75080	BZR1 (BRASSINAZOLE-RESISTANT 1)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	1e-1	38	Populus trichocarpa	PtpAffx.207355.1.S1_s_at	pmrna14593	hypothetical protein	-	4e-1	At5g53040	RWP-RK domain-containing protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.02	4e-1	34	Vitis vinifera	1613032_at	CD715441	-	-	3e-1	At5g07490	unknown protein	C.G.	S.X.	Please select
0.03	2e+0	32	Zea mays	Zm.5496.1.S1_at	AY105645.1	hypothetical protein LOC100275844	-	4e+0	At2g25650	DNA-binding storekeeper protein-related	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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