Gene omics information

Query gene ID TaAffx.119928.1.A1_s_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6786.3TaAffx.119928.1.A1_s_atBJ251441--4e-2At1g14900HMGA (HIGH MOBILITY GROUP A)S.X.H.G.
0.6786.3Ta.10408.1.S1_atCN009026--2e-10At1g10470ARR4 (RESPONSE REGULATOR 4)S.X.H.G.
0.6786.3Ta.11777.1.S1_x_atBQ620561--5e-1At3g49430SRp34a (Ser/Arg-rich protein 34a)S.X.H.G.
0.6081.0Ta.1909.1.A1_atBE446796--5e-2At3g55390integral membrane family proteinS.X.H.G.
0.045.8Ta.5490.1.S1_atCD863459--5e+0At2g36030unknown proteinS.X.H.G.
0.034.7TaAffx.135003.1.S1_atCA655173--4e+0At2g47770benzodiazepine receptor-relatedS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
12.699.4GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
10.799.2GSM298065Leaf tissue of Paragon at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
8.798.9GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
8.498.9GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
7.998.7GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.398.6GSM298069Leaf tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
7.198.5GSM250891TcLr1_3dpi_mock_rep2GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.598.3GSM250904TcLr1_7dpi_inoculated_rep1GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.498.2GSM250889Tc_3dpi_mock_rep2GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.398.2GSM250892TcLr1_3dpi_inoculated_rep2GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.423e-144510Ta.10408.1.S1_atCN009026--2e-10At1g10470ARR4 (RESPONSE REGULATOR 4)C.G.S.X.
0.484e-51200Ta.10408.2.A1_atCA651244--6e+0At5g65300unknown proteinC.G.S.X.
0.323e-24111TaAffx.58537.1.S1_atCA618748--1e+0At5g05365metal ion bindingC.G.S.X.
0.039e-340Ta.27092.1.S1_atBT009092.1--1e+0At4g25515SLK3 (SEUSS-LIKE 3)C.G.S.X.
0.024e-238Ta.27497.1.S1_atBQ168747--1e-14At5g47730SEC14 cytosolic factor, putative / polyphosphoinositide-binding protein, putativeC.G.S.X.
0.024e-238Ta.12683.1.S1_atCD889349--3e-3At3g19950zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.041e-136TaAffx.8895.2.S1_atCA618450--2e-2At5g61270PIF7 (PHYTOCHROME-INTERACTING FACTOR7)C.G.S.X.
0.041e-136TaAffx.8895.1.S1_atBJ252273--2e-2At5g61270PIF7 (PHYTOCHROME-INTERACTING FACTOR7)C.G.S.X.
0.011e-136TaAffx.122320.1.S1_atBQ620251--2e-8At1g25540PFT1 (PHYTOCHROME AND FLOWERING TIME 1)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.044e-238Arabidopsis thalianaAt1g14900838055HMGA (HIGH MOBILITY GROUP A)Encodes a protein belonging to the subgroup of HMGA (high mobility group A) proteins that interact with A/T-rich stretches of DNA.---C.G.S.X.
0.045e-238Glycine maxHgAffx.13483.1.A1_atCB374499--2e-2At5g61270PIF7 (PHYTOCHROME-INTERACTING FACTOR7)C.G.S.X.
0.402e-85313Hordeum vulgareContig5953_atContig5953--2e-10At1g10470ARR4 (RESPONSE REGULATOR 4)C.G.S.X.
0.276e-27121Oryza sativaOs11g0143300AK058585.1--5e-7At3g57040ARR9 (RESPONSE REGULATOR 9)C.G.S.X.
0.055e-238Populus trichocarpaPtpAffx.53536.1.S1_atDN498588--1e+0At3g47690ATEB1AC.G.S.X.
0.067e-132Vitis vinifera1622571_atCB970577hypothetical protein LOC100255631-3e-11At2g21230bZIP family transcription factorC.G.S.X.
0.141e-24111Zea maysZm.325.1.A1_atAB042268.1response regulator 6-2e-7At3g57040ARR9 (RESPONSE REGULATOR 9)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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