Gene omics information

Query gene ID	TaAffx.119776.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.95	99.1	TaAffx.119776.1.S1_at	BJ258989	-	-	2e-11	At3g45130	LAS1	S.X.	H.G.	Please select
0.92	98.5	TaAffx.120368.1.A1_x_at	BJ228047	-	-	4e+0	At5g57920	plastocyanin-like domain-containing protein	S.X.	H.G.	Please select
0.91	98.2	Ta.3740.3.S1_a_at	BJ257034	-	-	4e+0	At5g06270	unknown protein	S.X.	H.G.	Please select
0.90	94.8	Ta.10216.2.S1_at	BJ244515	-	-	4e+0	At5g65880	unknown protein	S.X.	H.G.	Please select
0.89	94.6	Ta.8284.1.S1_at	CD887397	-	-	1e-1	At5g28830	calcium-binding EF hand family protein	S.X.	H.G.	Please select
0.89	94.6	Ta.18047.1.S1_at	CA627677	-	-	9e+0	At2g06095	unknown protein	S.X.	H.G.	Please select
0.88	94.4	Ta.10382.1.S1_at	BJ251111	-	-	4e+0	At5g04850	VPS60.2	S.X.	H.G.	Please select
0.88	94.4	TaAffx.38194.1.S1_at	BJ245735	-	-	3e-1	At5g45280	pectinacetylesterase, putative	S.X.	H.G.	Please select
0.88	94.4	Ta.3740.1.A1_at	BJ262607	-	-	1e+0	At2g25510	unknown protein	S.X.	H.G.	Please select
0.87	94.2	TaAffx.113450.1.S1_at	CA612138	-	-	2e-1	At4g01330	ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
119.2	100.0	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
84.8	100.0	GSM314274	tissue type: floral bracts, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
52.2	99.9	GSM314272	tissue type: floral bracts, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
14.0	99.5	GSM315202	target strand labeled: Sense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
11.8	99.3	GSM314271	tissue type: immature inflorescence - rep3	GSE12508	Transcription patterns during wheat development
10.5	99.2	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.0	96.3	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development
3.8	96.0	GSM250914	Tc_7dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.8	93.6	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
2.7	93.3	GSM298053	Leaf tissue of Harnesk at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.20	7e-36	151	Ta.9982.1.S1_at	CA599875	-	-	9e-32	At2g07050	CAS1 (cycloartenol synthase 1)	C.G.	S.X.	Please select
0.05	2e-2	40	Ta.8674.2.S1_at	CA739761	-	-	2e-3	At3g45130	LAS1	C.G.	S.X.	Please select
0.03	3e-1	36	Ta.23082.1.S1_x_at	CA616144	-	-	2e+0	At3g17160	unknown protein	C.G.	S.X.	Please select
0.03	3e-1	36	Ta.23082.1.S1_s_at	CA616144	-	-	2e+0	At3g17160	unknown protein	C.G.	S.X.	Please select
0.02	3e-1	36	Ta.16744.1.S1_a_at	CD453088	-	-	3e+0	At1g28610	GDSL-motif lipase, putative	C.G.	S.X.	Please select
0.02	3e-1	36	Ta.16744.1.S1_at	CD453088	-	-	3e+0	At1g28610	GDSL-motif lipase, putative	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.92763.1.S1_at	BJ248622	-	-	4e+0	At2g22425	peptidase	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.65656.1.S1_at	CD886964	-	-	6e+0	At4g31720	TAFII15 (TBP-ASSOCIATED FACTOR II 15)	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.64698.1.S1_at	CA683225	-	-	3e-1	At1g62333	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	2e-11	69	Arabidopsis thaliana	At3g45130	823649	LAS1	F:lanosterol synthase activity;P:pentacyclic triterpenoid biosynthetic process;C:cellular_component unknown;BPOFMA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.09	7e-9	61	Glycine max	Gma.6863.1.S1_at	BQ628209	-	-	2e-35	At2g07050	CAS1 (cycloartenol synthase 1)	C.G.	S.X.	Please select
0.21	4e-45	180	Hordeum vulgare	Contig11705_at	Contig11705	-	-	3e-29	At2g07050	CAS1 (cycloartenol synthase 1)	C.G.	S.X.	Please select
0.28	4e-125	448	Oryza sativa	Os.12282.1.S1_a_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.13	4e-4	46	Populus trichocarpa	PtpAffx.120914.1.A1_at	CV260779	-	-	6e-25	At2g07050	CAS1 (cycloartenol synthase 1)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.09	3e-1	34	Vitis vinifera	1614893_at	CF568825	-	-	1e-3	At1g78950	beta-amyrin synthase, putative	C.G.	S.X.	Please select
0.48	3e-33	141	Zea mays	Zm.5697.1.S1_a_at	BU093479	-	-	2e-3	At2g07050	CAS1 (cycloartenol synthase 1)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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