Gene omics information

Query gene ID	TaAffx.119266.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.77	90.8	TaAffx.119266.1.S1_at	BJ280207	-	-	6e-3	At1g64060	ATRBOH F (ARABIDOPSIS THALIANA RESPIRATORY BURST OXIDASE PROTEIN F)	S.X.	H.G.	Please select
0.50	72.4	TaAffx.73914.1.S1_at	CA656400	-	-	2e-6	At3g04910	WNK1 (WITH NO LYSINE (K) 1)	S.X.	H.G.	Please select
0.38	54.7	TaAffx.105851.1.S1_s_at	CA729017	-	-	4e+0	At2g05520	GRP-3 (GLYCINE-RICH PROTEIN 3)	S.X.	H.G.	Please select
0.25	32.1	Ta.7051.2.S1_at	BJ314502	-	-	1e-9	At1g64060	ATRBOH F (ARABIDOPSIS THALIANA RESPIRATORY BURST OXIDASE PROTEIN F)	S.X.	H.G.	Please select
0.12	13.3	Ta.11296.2.S1_at	CK210601	-	-	7e-6	At4g26510	ATP binding / kinase/ phosphotransferase, alcohol group as acceptor / uracil phosphoribosyltransferase	S.X.	H.G.	Please select
0.11	12.4	TaAffx.93901.1.S1_at	CA604755	protein kinase	-	3e-18	At2g20470	kinase	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
25.5	99.8	GSM314275	tissue type: pistil, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
22.3	99.8	GSM314272	tissue type: floral bracts, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
18.1	99.7	GSM314277	tissue type: pistil, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
15.3	99.6	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
14.7	99.5	GSM314276	tissue type: pistil, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
10.1	99.2	GSM314274	tissue type: floral bracts, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
9.2	99.0	GSM343678	Wheat var. Kennedy_control_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
8.4	98.9	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
7.7	98.7	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
7.6	98.7	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	2e-3	44	Ta.4947.1.S1_at	BT009400.1	-	-	1e-9	At5g47910	RBOHD (RESPIRATORY BURST OXIDASE HOMOLOGUE D)	C.G.	S.X.	Please select
0.03	3e-2	40	TaAffx.64682.1.S1_at	CA652881	-	-	3e-2	At5g47910	RBOHD (RESPIRATORY BURST OXIDASE HOMOLOGUE D)	C.G.	S.X.	Please select
0.07	4e-1	36	Ta.7686.2.S1_at	BJ212425	-	-	7e-3	At4g35410	clathrin adaptor complex small chain family protein	C.G.	S.X.	Please select
0.02	4e-1	36	Ta.26264.1.S1_at	CD490441	-	-	2e-1	At4g32600	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.01	2e+0	34	Ta.6406.1.S1_at	BJ303896	-	-	2e-5	At1g29370	kinase-related	C.G.	S.X.	Please select
0.03	6e+0	32	TaAffx.78915.1.S1_at	CA724842	-	-	8e-1	At3g20550	DDL (DAWDLE)	C.G.	S.X.	Please select
0.03	6e+0	32	TaAffx.78566.1.S1_at	CA730790	-	-	1e+1	At1g27140	ATGSTU14 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 14)	C.G.	S.X.	Please select
0.03	6e+0	32	TaAffx.53682.1.S1_x_at	CA690081	-	-	4e+0	At5g40590	DC1 domain-containing protein	C.G.	S.X.	Please select
0.03	6e+0	32	TaAffx.53682.1.S1_s_at	CA690081	-	-	4e+0	At5g40590	DC1 domain-containing protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.09	6e-3	42	Arabidopsis thaliana	At1g64060	842710	ATRBOH F (ARABIDOPSIS THALIANA RESPIRATORY BURST OXIDASE PROTEIN F)	Interacts with AtrbohD gene to fine tune the spatial control of ROI production and hypersensitive response to cell in and around infection site.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.14	2e-3	44	Glycine max	Gma.6763.1.A1_at	BU544794	-	-	1e-30	At1g64060	ATRBOH F (ARABIDOPSIS THALIANA RESPIRATORY BURST OXIDASE PROTEIN F)	C.G.	S.X.	Please select
0.02	7e-1	34	Hordeum vulgare	Contig9345_at	Contig9345	-	-	1e-6	At1g27330	-	C.G.	S.X.	Please select
0.30	8e-155	547	Oryza sativa	Os05g0528000	AK120905.1	-	RbohAOsp (Fragment)	2e-27	At1g64060	ATRBOH F (ARABIDOPSIS THALIANA RESPIRATORY BURST OXIDASE PROTEIN F)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.14	4e-8	59	Populus trichocarpa	PtpAffx.200399.1.S1_s_at	pmrna802	-	-	4e-87	At1g64060	ATRBOH F (ARABIDOPSIS THALIANA RESPIRATORY BURST OXIDASE PROTEIN F)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	4e-1	34	Vitis vinifera	1609128_at	CF209450	-	-	5e-1	At5g49050	-	C.G.	S.X.	Please select
0.28	4e-76	284	Zea mays	Zm.4309.1.S1_at	AW052961	respiratory burst oxidase protein B	-	1e-25	At1g64060	ATRBOH F (ARABIDOPSIS THALIANA RESPIRATORY BURST OXIDASE PROTEIN F)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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