Gene omics information

Query gene ID TaAffx.116570.1.S1_x_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.2TaAffx.116570.1.S1_x_atAL825027--2e-8At3g04720PR4 (PATHOGENESIS-RELATED 4)S.X.H.G.
0.8393.4TaAffx.116570.1.S1_atAL825027--2e-8At3g04720PR4 (PATHOGENESIS-RELATED 4)S.X.H.G.
0.5072.4TaAffx.108556.1.S1_atCA692789--2e-2At3g04720PR4 (PATHOGENESIS-RELATED 4)S.X.H.G.
0.5072.4TaAffx.108556.1.S1_x_atCA692789--1e+0At3g04720PR4 (PATHOGENESIS-RELATED 4)S.X.H.G.
0.5072.4TaAffx.116570.1.S1_s_atAL825027--2e-8At3g04720PR4 (PATHOGENESIS-RELATED 4)S.X.H.G.
0.4666.8Ta.28.1.S1_atY18212.1glucan endo-1,3-beta-D-glucosidase-6e-1At3g23360protein phosphatase 2C, putative / PP2C, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
25.499.8GSM143507Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
24.399.8GSM143505Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
23.599.8GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
22.799.8GSM143506Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
19.999.7GSM143517Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
18.699.7GSM143502Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
17.299.6GSM143515Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
16.499.6GSM250894TcLr34_3dpi_inoculated_rep2GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
12.299.4GSM143518Thatcher_Lr34 (susceptible), rust inoculated distal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
11.599.3GSM250892TcLr1_3dpi_inoculated_rep2GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.990940TaAffx.116570.1.S1_s_atAL825027--2e-8At3g04720PR4 (PATHOGENESIS-RELATED 4)C.G.S.X.
0.990940TaAffx.116570.1.S1_atAL825027--2e-8At3g04720PR4 (PATHOGENESIS-RELATED 4)C.G.S.X.
0.713e-161567TaAffx.116570.2.S1_atCA684050--2e-4At3g04720PR4 (PATHOGENESIS-RELATED 4)C.G.S.X.
0.541e-77289TaAffx.108556.1.S1_atCA692789--2e-2At3g04720PR4 (PATHOGENESIS-RELATED 4)C.G.S.X.
0.541e-77289TaAffx.108556.1.S1_x_atCA692789--1e+0At3g04720PR4 (PATHOGENESIS-RELATED 4)C.G.S.X.
0.323e-41169Ta.9226.1.S1_atCD915938Pathogenesis-related protein 4-7e+0At5g45890SAG12 (SENESCENCE-ASSOCIATED GENE 12)C.G.S.X.
0.343e-22105TaAffx.128595.1.S1_atCK216241--6e+0At5g37250zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.047e-238Ta.20878.2.S1_x_atCA619683--1e+1At5g35230unknown proteinC.G.S.X.
0.037e-238Ta.20878.1.S1_x_atCA622910--1e-3At2g06520PSBX (photosystem II subunit X)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.132e-859Arabidopsis thalianaAt3g04720819632PR4 (PATHOGENESIS-RELATED 4)Encodes a protein similar to the antifungal chitin-binding protein hevein from rubber tree latex. mRNA levels increase in response to ethylene and turnip crinkle virus infection.---C.G.S.X.
0.043e-136Glycine maxHgAffx.15331.1.S1_atCB281663--4e+0At3g52260pseudouridine synthase family proteinC.G.S.X.
0.702e-145513Hordeum vulgareContig6576_atContig6576--6e-6At3g04720PR4 (PATHOGENESIS-RELATED 4)C.G.S.X.
0.287e-31135Oryza sativaOs11g0592000AK121059.1-Barwin7e-3At3g04720PR4 (PATHOGENESIS-RELATED 4)C.G.S.X.
0.071e+034Populus trichocarpaPtp.2463.2.S1_atDN484793hypothetical protein-4e-1At3g04720PR4 (PATHOGENESIS-RELATED 4)C.G.S.X.
0.168e-856Vitis vinifera1618835_s_atBQ797163hypothetical protein LOC100255405-2e-11At3g04720PR4 (PATHOGENESIS-RELATED 4)C.G.S.X.
0.444e-41167Zea maysZm.2227.1.A1_atBM381059hypothetical protein LOC100191593-6e-3At3g04720PR4 (PATHOGENESIS-RELATED 4)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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