Gene omics information

Query gene ID TaAffx.115983.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7389.1TaAffx.115983.1.S1_atCA685242--4e-1At4g15120VQ motif-containing proteinS.X.H.G.
0.2839.2Ta.11100.1.S1_atBJ272744--3e-2At5g06660unknown proteinS.X.H.G.
0.2227.1TaAffx.71016.1.A1_atBE424472--1e+0At3g22930calmodulin, putativeS.X.H.G.
0.1922.4TaAffx.129081.2.S1_s_atCA608630--2e-2At4g32714SCRL25 (SCR-Like 25)S.X.H.G.
0.1922.4Ta.29444.2.S1_a_atCA684925--4e-2At3g55050serine/threonine protein phosphatase 2C (PP2C6)S.X.H.G.
0.0910.4Ta.7991.3.S1_x_atCA705300--8e-1At3g17980C2 domain-containing proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
20.799.7GSM143521Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
13.599.5GSM143524Thatcher_Lr34 (susceptible), mock inoculated distal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
12.599.4GSM138153genotype G32 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
8.298.8GSM143508Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
7.498.6GSM138154genotype H5 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
7.098.5GSM143523Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
5.597.8GSM143525Thatcher_Lr34 (susceptible), mock inoculated distal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
5.597.8GSM111236genotype F38b developing seed at 5 days after anthesis, biological rep1GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
5.397.6GSM143518Thatcher_Lr34 (susceptible), rust inoculated distal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
5.397.6GSM250886TcLr1_3dpi_inoculated_rep1GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.133e-1789Ta.12836.1.S1_atCA668366--3e+0At3g22160VQ motif-containing proteinC.G.S.X.
0.049e-238Ta.28798.1.S1_x_atCD452943--7e-8At2g45070SEC61 BETAC.G.S.X.
0.024e-136Ta.10130.1.S1_atCK198845--8e-1At2g40220ABI4 (ABA INSENSITIVE 4)C.G.S.X.
0.032e+034TaAffx.98753.2.S1_atCA684544--7e-5At3g55450protein kinase, putativeC.G.S.X.
0.032e+034TaAffx.98869.1.S1_atCA685901--4e+0At3g03170unknown proteinC.G.S.X.
0.032e+034TaAffx.99201.1.S1_atCA685457--5e-8At4g18230-C.G.S.X.
0.032e+034TaAffx.98862.1.S1_atCA689020--4e+0At2g33830dormancy/auxin associated family proteinC.G.S.X.
0.032e+034TaAffx.98753.2.S1_s_atCA684544--7e-5At3g55450protein kinase, putativeC.G.S.X.
0.022e+034TaAffx.94998.1.S1_atCA607841--2e+0At2g36470unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.054e-136Arabidopsis thalianaAt4g15120827178VQ motif-containing proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;POMFA---C.G.S.X.
0.063e-859Glycine maxGmaAffx.87526.1.S1_atBM954581--6e+0At5g63470NF-YC4 (NUCLEAR FACTOR Y, SUBUNIT C4)C.G.S.X.
0.392e-29129Hordeum vulgareHVSMEb0007D15r2_atHVSMEb0007D15r2--2e-1At4g15120VQ motif-containing proteinC.G.S.X.
0.204e-24113Oryza sativaOs06g0666400AK108002.1-VQ domain containing protein6e+0At4g15120VQ motif-containing proteinC.G.S.X.
0.032e+034Populus trichocarpaPtpAffx.95247.1.A1_atCV255118--8e+0At5g49700DNA-binding protein-relatedC.G.S.X.
0.034e-134Vitis vinifera1622174_atCB912233hypothetical protein LOC100241032-5e+0At4g38090unknown proteinC.G.S.X.
0.111e-23109Zea maysZm.16973.1.S1_atCD219246VQ motif family protein-1e-8At3g22160VQ motif-containing proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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