CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID TaAffx.112322.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.60 81.0 TaAffx.112322.1.S1_at CA706806 - - 4e+0 At4g32208 - S.X. H.G.
0.71 88.0 Ta.7493.1.S1_at CK205703 - - 2e+0 At3g53050 galactose-binding lectin family protein S.X. H.G.
0.63 83.1 Ta.8051.1.S1_at CK168230 - - 3e+0 At5g23310 FSD3 (FE SUPEROXIDE DISMUTASE 3) S.X. H.G.
0.55 76.8 TaAffx.53324.1.S1_x_at CA693604 - - 9e+0 At4g09070 - S.X. H.G.
0.47 67.9 Ta.12083.1.A1_at CD885615 - - 1e+0 At5g17470 calmodulin-related protein, putative S.X. H.G.
0.36 51.9 Ta.25402.1.S1_at CK160504 - - 4e-42 At1g11430 plastid developmental protein DAG, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
11.8 99.3 GSM343682 Wheat var. Kennedy_control_rep2 GSE13660 Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
11.5 99.3 GSM343685 Wheat var. Kennedy_control_rep3 GSE13660 Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
11.2 99.3 GSM343687 Wheat var. Kennedy_Fp inoculated_rep2 GSE13660 Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
9.8 99.1 GSM343678 Wheat var. Kennedy_control_rep1 GSE13660 Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
9.0 99.0 GSM343688 Wheat var. Kennedy_Fp inoculated_rep3 GSE13660 Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
9.0 99.0 GSM250900 TcLr34_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.9 99.0 GSM250895 Tc_3dpi_mock_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.9 98.7 GSM250898 TcLr1_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.2 98.5 GSM250899 TcLr34_3dpi_mock_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.2 98.5 GSM343686 Wheat var. Kennedy_Fp inoculated_rep1 GSE13660 Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 3e-1 36 Ta.9767.2.S1_at BJ225987 - - 4e+0 At5g47920 unknown protein C.G. S.X.
0.02 3e-1 36 Ta.7088.1.S1_at CK205722 - - 7e-1 At3g02700 NC domain-containing protein C.G. S.X.
0.03 1e+0 34 Ta.8415.1.S1_at BM140381 - - 4e+0 At5g62950 catalytic/ nucleotide binding C.G. S.X.
0.03 1e+0 34 Ta.10405.1.A1_x_at BJ245538 - - 4e+0 At5g48490 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein C.G. S.X.
0.03 1e+0 34 Ta.10405.1.A1_at BJ245538 - - 4e+0 At5g48490 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein C.G. S.X.
0.04 4e+0 32 TaAffx.80403.1.S1_at CA697251 - - 1e+1 At5g07600 oleosin / glycine-rich protein C.G. S.X.
0.04 4e+0 32 TaAffx.4283.1.S1_at CA745740 - - 1e-1 At1g64880 ribosomal protein S5 family protein C.G. S.X.
0.04 4e+0 32 TaAffx.4283.2.S1_at CA747103 - - 8e+0 At5g07580 DNA binding / transcription factor C.G. S.X.
0.02 4e+0 32 Ta.6451.1.S1_at BJ300246 - - 7e-1 At2g11910 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 4e+0 32 Arabidopsis thaliana At4g32208 6241015 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOPAMF - - - C.G. S.X.
0.03 6e+0 32 Glycine max PsAffx.C265000005_at PsAffx.C265000005 - - 9e-1 At3g60961 ATP binding / nucleobase, nucleoside, nucleotide kinase C.G. S.X.
0.26 4e-60 230 Hordeum vulgare Contig14782_at Contig14782 - - 2e+0 At5g65350 histone H3 C.G. S.X.
0.03 2e+0 34 Oryza sativa OsAffx.24664.1.S1_at - - - 0 C.G. S.X.
0.03 5e+0 32 Populus trichocarpa PtpAffx.7932.4.S1_a_at BU893679 hypothetical protein - 1e-55 At1g47330 - C.G. S.X.
0.03 1e+0 32 Vitis vinifera 1613488_at CF214643 hypothetical protein LOC100266545 - 2e-5 At5g16930 AAA-type ATPase family protein C.G. S.X.
0.02 7e+0 30 Zea mays Zm.8551.1.A1_at BM333970 - - 2e+0 At5g57290 60S acidic ribosomal protein P3 (RPP3B) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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