Gene omics information

Query gene ID	TaAffx.112158.1.S1_x_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.73	89.1	TaAffx.112158.1.S1_x_at	CA626538	-	-	2e+1	At3g28590	unknown protein	S.X.	H.G.	Please select
0.73	89.1	TaAffx.112158.1.S1_at	CA626538	-	-	2e+1	At3g28590	unknown protein	S.X.	H.G.	Please select
0.50	72.4	TaAffx.50210.1.S1_at	CA744417	-	-	7e-2	At1g60880	AGL56	S.X.	H.G.	Please select
0.50	72.4	TaAffx.58638.1.S1_at	CA617698	-	-	4e+0	At1g12805	nucleotide binding	S.X.	H.G.	Please select
0.50	72.4	TaAffx.30673.1.S1_at	CA623010	-	-	7e-11	At4g25630	FIB2 (FIBRILLARIN 2)	S.X.	H.G.	Please select
0.50	72.4	TaAffx.78861.1.S1_at	CA725589	-	-	1e+1	At3g28070	nodulin MtN21 family protein	S.X.	H.G.	Please select
0.27	35.6	TaAffx.55653.1.S1_at	CA663094	-	-	1e+1	At4g20030	RNA recognition motif (RRM)-containing protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
11.1	99.3	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
6.6	98.3	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.3	98.2	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.8	97.9	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.6	97.8	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.1	97.5	GSM298066	Leaf tissue of Paragon at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.8	97.2	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.6	97.0	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.4	96.8	GSM298064	Crown tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.9	96.1	GSM250908	Tc_7dpi_inoculated_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
1.00	0	997	TaAffx.112158.1.S1_at	CA626538	-	-	2e+1	At3g28590	unknown protein	C.G.	S.X.	Please select
0.02	3e-1	36	Ta.25198.1.S1_x_at	CK196324	-	-	3e+0	At5g20460	unknown protein	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.30808.1.S1_at	CA621892	-	-	2e+1	At3g55420	unknown protein	C.G.	S.X.	Please select
0.04	1e+0	34	TaAffx.110201.1.S1_at	CA713083	-	-	1e+1	At5g06500	AGL96 (AGAMOUS-LIKE 96)	C.G.	S.X.	Please select
0.01	1e+0	34	Ta.3423.1.S1_at	CD373787	-	-	6e-2	At2g32770	purple acid phosphatase (PAP13)	C.G.	S.X.	Please select
0.02	4e+0	32	TaAffx.65635.1.S1_at	CD909051	-	-	2e-1	At5g39300	ATEXPA25 (ARABIDOPSIS THALIANA EXPANSIN A25)	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.59785.1.S1_at	CA595318	-	-	4e+0	At2g34430	LHB1B1	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.37863.1.S1_at	BJ261313	-	-	3e-1	At4g18060	clathrin binding	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.3542.1.S1_at	BQ801099	-	-	3e-1	At2g45530	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	2e+1	30	Arabidopsis thaliana	At3g28590	822489	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	1e+0	34	Glycine max	HgAffx.17626.1.S1_at	CB278764	-	-	9e-1	At5g25090	plastocyanin-like domain-containing protein	C.G.	S.X.	Please select
0.03	2e+0	32	Hordeum vulgare	EBro08_SQ002_M03_at	EBro08_SQ002_M03	-	-	2e-1	At4g09270	unknown protein	C.G.	S.X.	Please select
0.04	2e+0	34	Oryza sativa	OsAffx.3568.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	2e+1	30	Populus trichocarpa	PtpAffx.50667.1.A1_at	CV237201	-	-	1e+1	At5g62200	embryo-specific protein-related	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	2e+1	28	Vitis vinifera	1617918_at	CF568942	-	-	8e-26	At4g29190	zinc finger (CCCH-type) family protein	C.G.	S.X.	Please select
0.43	5e-121	432	Zea mays	Zm.1179.1.S1_at	AJ006539	hypothetical protein LOC100273704	-	1e+1	At5g63030	glutaredoxin, putative	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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