Gene omics information

Query gene ID	TaAffx.112085.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.63	83.1	TaAffx.112085.1.S1_at	CA627212	-	-	4e+0	At4g15710	unknown protein	S.X.	H.G.	Please select
0.55	76.8	TaAffx.105718.1.S1_at	CA730771	-	-	5e-5	At1g71130	AP2 domain-containing transcription factor, putative	S.X.	H.G.	Please select
0.44	64.5	TaAffx.113656.1.S1_at	CA607407	-	-	3e-1	At2g36255	-	S.X.	H.G.	Please select
0.44	64.5	TaAffx.78397.1.S1_at	CA659643	-	-	2e+1	At1g74900	OTP43 (organelle transcript processing defect 43)	S.X.	H.G.	Please select
0.32	44.4	TaAffx.12644.1.S1_at	BJ247681	-	-	4e-1	At1g18800	NRP2 (NAP1-RELATED PROTEIN 2)	S.X.	H.G.	Please select
0.29	39.2	RPTR-Ta-L36849-1_at	RPTR-Ta-L36849-1	-	-	0			S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
33.4	99.9	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
22.1	99.8	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
21.4	99.7	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
17.2	99.6	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
9.9	99.1	GSM138162	genotype E5 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
9.8	99.1	GSM298069	Leaf tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
7.9	98.7	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
5.9	98.0	GSM138210	genotype B65 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
5.3	97.6	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.8	97.2	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.07	3e-10	65	Ta.25838.1.A1_at	CD453571	-	-	2e+1	At5g23160	unknown protein	C.G.	S.X.	Please select
0.11	2e-8	59	Ta.19253.1.S1_at	CA615000	-	-	5e-4	At1g27130	ATGSTU13 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 13)	C.G.	S.X.	Please select
0.06	3e-7	56	Ta.27417.1.S1_at	CK200245	-	-	5e-1	At3g09270	ATGSTU8 (GLUTATHIONE S-TRANSFERASE TAU 8)	C.G.	S.X.	Please select
0.20	5e-6	52	TaAffx.128833.1.S1_at	CA694668	-	-	1e+0	At1g07175	unknown protein	C.G.	S.X.	Please select
0.06	5e-6	52	TaAffx.110629.2.S1_x_at	CA678087	-	-	9e-1	At2g29450	ATGSTU5 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 5)	C.G.	S.X.	Please select
0.05	5e-6	52	TaAffx.110629.1.S1_x_at	AL825906	-	-	1e+0	At4g11650	ATOSM34 (osmotin 34)	C.G.	S.X.	Please select
0.05	5e-6	52	TaAffx.110629.1.S1_at	AL825906	-	-	1e+0	At4g11650	ATOSM34 (osmotin 34)	C.G.	S.X.	Please select
0.10	5e-6	52	Ta.25779.1.S1_at	CD373896	-	-	7e+0	At5g03010	kelch repeat-containing protein	C.G.	S.X.	Please select
0.08	5e-6	52	Ta.1457.2.S1_at	BJ294798	glutathione transferase	-	3e-3	At1g10370	ERD9 (EARLY-RESPONSIVE TO DEHYDRATION 9)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	4e+0	32	Arabidopsis thaliana	At4g15710	827248	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	1e-1	38	Glycine max	Gma.16720.1.S1_at	BQ611813	glutathione S-transferase GST 13	-	3e-4	At1g74590	GSTU10 (GLUTATHIONE S-TRANSFERASE TAU 10)	C.G.	S.X.	Please select
0.12	9e-6	50	Hordeum vulgare	Contig15264_at	Contig15264	-	-	2e+0	At1g31750	proline-rich family protein	C.G.	S.X.	Please select
0.21	6e-13	75	Oryza sativa	Os01g0950300	AK107822.1	-	Glutathione S-transferase GST 29 (EC 2.5.1.18)	2e-3	At3g09270	ATGSTU8 (GLUTATHIONE S-TRANSFERASE TAU 8)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	1e-1	38	Populus trichocarpa	PtpAffx.812.1.A1_at	CV272140	hypothetical protein	-	2e-6	At1g74590	GSTU10 (GLUTATHIONE S-TRANSFERASE TAU 10)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	5e+0	30	Vitis vinifera	1607805_s_at	CF605243	hypothetical protein LOC100263428	-	2e-1	At4g31500	CYP83B1 (CYTOCHROME P450 MONOOXYGENASE 83B1)	C.G.	S.X.	Please select
0.43	4e-137	486	Zea mays	Zm.549.1.A1_at	AF244686.1	glutathione S-transferase GST 21	-	2e+0	At2g09840	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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