Gene omics information

Query gene ID	TaAffx.110807.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.63	83.1	TaAffx.110807.1.S1_at	CA654006	-	-	3e-1	At1g51730	RWD domain-containing protein	S.X.	H.G.	Please select
0.50	72.4	TaAffx.105223.1.S1_at	CA737547	-	-	4e-1	At3g13275	unknown protein	S.X.	H.G.	Please select
0.50	72.4	TaAffx.105223.1.S1_x_at	CA737547	-	-	4e-1	At3g13275	unknown protein	S.X.	H.G.	Please select
0.21	25.5	Ta.23348.3.A1_a_at	CA675884	-	-	4e+0	At1g60985	SCRL6 (SCR-Like 6)	S.X.	H.G.	Please select
0.15	17.1	Ta.6777.2.A1_x_at	CD885593	-	-	2e-20	At5g51150	unknown protein	S.X.	H.G.	Please select
0.12	13.3	Ta.3659.1.S1_a_at	CA670477	-	-	2e-14	At4g15802	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
8.3	98.8	GSM314274	tissue type: floral bracts, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
7.0	98.5	GSM138169	genotype B68 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.8	97.2	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
4.8	97.2	GSM314272	tissue type: floral bracts, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
4.6	97.0	GSM138162	genotype E5 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.1	96.4	GSM138199	genotype C22 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.8	96.0	GSM250916	TcLr1_7dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.7	95.8	GSM250910	TcLr1_7dpi_inoculated_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.3	95.0	GSM138136	Genotype Domain developing seed at 5 days after anthesis, biological rep1 location SB	GSE5937	Wheat expression level polymorphism study parental genotypes 2 biological reps from SB location
3.1	94.5	GSM314276	tissue type: pistil, before anthesis - rep2	GSE12508	Transcription patterns during wheat development

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.48	2e-63	242	TaAffx.78228.1.S1_at	CA735654	-	-	4e-1	At5g59350	unknown protein	C.G.	S.X.	Please select
0.04	2e-2	40	TaAffx.113079.1.S1_at	CA618243	-	-	1e-9	At5g13850	NACA3 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3)	C.G.	S.X.	Please select
0.04	7e-2	38	Ta.3128.2.A1_a_at	BJ231772	-	-	1e+0	At5g19800	hydroxyproline-rich glycoprotein family protein	C.G.	S.X.	Please select
0.03	7e-2	38	Ta.10274.1.S1_at	CD917751	-	-	9e-3	At5g63740	zinc finger protein-related	C.G.	S.X.	Please select
0.04	3e-1	36	TaAffx.82691.1.S1_s_at	CA668498	-	-	1e-2	At2g32460	MYB101	C.G.	S.X.	Please select
0.05	3e-1	36	TaAffx.57622.1.S1_at	CA626455	-	-	2e-2	At4g03210	XTH9 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 9)	C.G.	S.X.	Please select
0.04	3e-1	36	Ta.7522.3.S1_at	CA727768	-	-	1e+0	At5g41050	unknown protein	C.G.	S.X.	Please select
0.04	3e-1	36	Ta.7522.3.S1_x_at	CA727768	-	-	1e+0	At5g41050	unknown protein	C.G.	S.X.	Please select
0.02	3e-1	36	Ta.6362.1.S1_s_at	BJ284287	-	-	3e-2	At1g52870	peroxisomal membrane protein-related	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	3e-1	36	Arabidopsis thaliana	At1g51730	841598	RWD domain-containing protein	F:unknown;P:biological_process unknown;C:cellular_component unknown;MFOPB	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.05	9e-2	38	Glycine max	GmaAffx.12007.1.A1_at	BU551279	-	-	4e-3	At5g59000	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.54	3e-135	480	Hordeum vulgare	Contig17501_at	Contig17501	-	-	3e-2	At5g67520	adenylylsulfate kinase, putative	C.G.	S.X.	Please select
0.22	7e-28	125	Oryza sativa	Os04g0616100	9632.m05094	-	TPR-like domain containing protein	3e-2	At3g01860	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	4e-1	36	Populus trichocarpa	PtpAffx.221995.1.S1_at	pmrna39178	hypothetical protein	-	1e-3	At5g56950	NAP1	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.05	3e-1	34	Vitis vinifera	1609773_at	CB978867	hypothetical protein LOC100261732	-	1e+0	At3g11600	unknown protein	C.G.	S.X.	Please select
0.28	9e-18	89	Zea mays	ZmAffx.929.1.S1_at	AI795460	-	-	5e-2	At5g17900	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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