Gene omics information

Query gene ID	TaAffx.110147.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	TaAffx.110147.1.S1_at	BG905569	-	-	1e+1	At4g37409	unknown protein	S.X.	H.G.	Please select
0.55	76.8	Ta.5437.1.S1_at	CK204523	-	-	4e-5	At5g23750	remorin family protein	S.X.	H.G.	Please select
0.55	76.8	Ta.21345.1.A1_x_at	CA718360	-	-	2e+1	At5g26330	plastocyanin-like domain-containing protein / mavicyanin, putative	S.X.	H.G.	Please select
0.50	72.4	Ta.21345.1.A1_at	CA718360	-	-	2e+1	At5g26330	plastocyanin-like domain-containing protein / mavicyanin, putative	S.X.	H.G.	Please select
0.40	58.4	Ta.8988.1.S1_at	BQ162735	-	-	4e+0	At5g41810	unknown protein	S.X.	H.G.	Please select
0.38	54.7	Ta.303.1.S1_x_at	BG906281	-	-	3e+0	At3g28590	unknown protein	S.X.	H.G.	Please select

Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
51.1	99.9	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
48.0	99.9	GSM298069	Leaf tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
19.1	99.7	GSM298077	Leaf tissue of Solstice at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
17.5	99.7	GSM298081	Leaf tissue of Solstice at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
17.0	99.6	GSM298089	Leaf tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
16.5	99.6	GSM298078	Leaf tissue of Solstice at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
15.3	99.6	GSM298082	Leaf tissue of Solstice at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
15.0	99.6	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
12.4	99.4	GSM298057	Leaf tissue of Harnesk at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
11.1	99.3	GSM298091	Leaf tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars

Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.48	1e-46	186	Ta.21345.1.A1_x_at	CA718360	-	-	2e+1	At5g26330	plastocyanin-like domain-containing protein / mavicyanin, putative	C.G.	S.X.	Please select
0.48	1e-46	186	Ta.21345.1.A1_at	CA718360	-	-	2e+1	At5g26330	plastocyanin-like domain-containing protein / mavicyanin, putative	C.G.	S.X.	Please select
0.15	4e-12	71	TaAffx.79403.1.S1_at	CA716569	-	-	8e-1	At4g00040	chalcone and stilbene synthase family protein	C.G.	S.X.	Please select
0.04	3e-10	65	TaAffx.110124.1.S1_x_at	CA664426	-	-	3e+0	At2g14247	Expressed protein	C.G.	S.X.	Please select
0.04	3e-10	65	TaAffx.110124.1.S1_at	CA664426	-	-	3e+0	At2g14247	Expressed protein	C.G.	S.X.	Please select
0.04	1e-6	54	TaAffx.116491.1.S1_at	CA605687	-	-	3e-2	At1g44970	peroxidase, putative	C.G.	S.X.	Please select
0.05	7e-5	48	TaAffx.80918.1.S1_at	CA691176	-	-	2e+1	At5g18090	transcriptional factor B3 family protein	C.G.	S.X.	Please select
0.04	7e-5	48	TaAffx.129423.1.S1_x_at	CK152788	-	-	2e-2	At3g10320	transferase, transferring glycosyl groups	C.G.	S.X.	Please select
0.04	7e-5	48	TaAffx.129423.1.S1_at	CK152788	-	-	2e-2	At3g10320	transferase, transferring glycosyl groups	C.G.	S.X.	Please select

Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	1e+1	30	Arabidopsis thaliana	At4g37409	6240256	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.06	1e+0	34	Glycine max	GmaAffx.12286.2.S1_at	BM108265	-	-	1e-11	At5g38510	rhomboid family protein	C.G.	S.X.	Please select
0.38	6e-65	246	Hordeum vulgare	Contig12563_s_at	Contig12563	-	-	1e+0	At3g25716	unknown protein	C.G.	S.X.	Please select
0.05	8e-9	61	Oryza sativa	Os07g0501100	AK110924.1	-	Chalcone synthase (EC 2.3.1.74)(Naregenin-chalcone synthase)	2e-1	At2g14247	Expressed protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	5e-3	42	Populus trichocarpa	PtpAffx.16419.1.S1_at	CX654747	hypothetical protein	-	3e-1	At3g25640	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.06	7e-2	36	Vitis vinifera	1614133_at	CD711415	hypothetical protein LOC100255873	-	5e-2	At1g43800	acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative	C.G.	S.X.	Please select
0.06	4e-4	44	Zea mays	Zm.12295.2.S1_a_at	CD441109	stress responsive protein	-	2e-2	At2g39050	hydroxyproline-rich glycoprotein family protein	C.G.	S.X.	Please select

Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage