Gene omics information

Query gene ID TaAffx.108876.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5072.4TaAffx.108876.1.S1_atCA684367--2e+0At4g05350zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.6786.3TaAffx.54536.1.S1_x_atCA680299--2e-1At2g38340AP2 domain-containing transcription factor, putative (DRE2B)S.X.H.G.
0.5678.6Ta.22731.3.S1_atCA697465--2e+1At4g17440unknown proteinS.X.H.G.
0.5072.4TaAffx.110040.1.S1_atCA664997--4e+0At5g05830zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.4464.5Ta.3564.3.S1_x_atCA699601--3e-2At4g16770iron ion binding / oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donorsS.X.H.G.
0.3651.9TaAffx.105929.1.S1_atBJ226774--4e+0At5g19875unknown proteinS.X.H.G.
0.2735.6Ta.29509.2.S1_x_atCA698053--2e-5At1g63960unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
14.699.5GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
12.499.4GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
9.299.0GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.999.0GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.598.3GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.097.4GSM324492Si+ B- rep3GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
5.097.4GSM250908Tc_7dpi_inoculated_rep2GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.697.0GSM298079Leaf tissue of Solstice at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
4.596.9GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.496.8GSM143520Thatcher_Lr34 (susceptible), rust inoculated distal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.365e-28125Ta.25888.1.S1_atCD873606--7e-1At1g72970HTH (HOTHEAD)C.G.S.X.
0.152e-1893TaAffx.30033.2.S1_atCA630062--1e+1At5g50820anac097 (Arabidopsis NAC domain containing protein 97)C.G.S.X.
0.358e-1891Ta.10299.1.S1_atBJ251272--9e+0At5g23550-C.G.S.X.
0.062e-344Ta.16869.1.S1_atBJ273714--2e-5At4g02860catalyticC.G.S.X.
0.146e-342Ta.10299.2.S1_a_atBJ293297--1e+1At5g5144023.5 kDa mitochondrial small heat shock protein (HSP23.5-M)C.G.S.X.
0.034e-136Ta.1208.1.S1_atBE419896--3e-1At1g26799-C.G.S.X.
0.032e+034TaAffx.9532.1.S1_atCA596838--2e+1At2g40233unknown proteinC.G.S.X.
0.022e+034TaAffx.94825.1.S1_atBJ288944retinoblastoma-related protein 1-2e+0At3g63330protein kinase family proteinC.G.S.X.
0.042e+034TaAffx.78352.1.S1_atCA733749--4e-2At5g54170-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e+034Arabidopsis thalianaAt4g05350825883zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVB---C.G.S.X.
0.022e+034Glycine maxPsAffx.C333000006_atPsAffx.C333000006--2e-1At1g17700PRA1.F1 (PRENYLATED RAB ACCEPTOR 1.F1)C.G.S.X.
0.630900Hordeum vulgareContig9255_atContig9255--3e+0At3g47620AtTCP14 (TEOSINTE BRANCHED1, CYCLOIDEA and PCF (TCP) 14)C.G.S.X.
0.391e-1791Oryza sativaOs01g0266500AK101084.1-Phenazine biosynthesis PhzC/PhzF protein familyprotein9e+0At5g55570unknown proteinC.G.S.X.
0.038e+032Populus trichocarpaPtpAffx.213177.1.S1_s_atpmrna25777hypothetical protein-9e-1At5g57760unknown proteinC.G.S.X.
0.033e+128Vitis vinifera1621618_atCB344828similar to NADH dehydrogenase subunit I /// similar to NADH dehydrogenase subunit I-3e-29Atcg01100-C.G.S.X.
0.382e-28125Zea maysZm.8760.1.S1_atCK827613phenazine biosynthesis protein-7e-4At4g02860catalyticC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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