Gene omics information

Query gene ID TaAffx.108219.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8393.4TaAffx.108219.1.S1_atCA690622--3e-1At1g67090RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)S.X.H.G.
0.9198.2TaAffx.56013.1.S1_atCA658531--6e-1At5g38410ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)S.X.H.G.
0.7790.8Ta.1977.2.A1_atBE231484--1e+0At3g07430emb1990 (embryo defective 1990)S.X.H.G.
0.6182.0TaAffx.39457.1.A1_atBG904975--2e+0Atmg00850-S.X.H.G.
0.6182.0TaAffx.26385.1.S1_x_atCA689363--4e+0At5g25090plastocyanin-like domain-containing proteinS.X.H.G.
0.5072.4TaAffx.26385.1.S1_atCA689363--4e+0At5g25090plastocyanin-like domain-containing proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
15.899.6GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
13.499.5GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
11.999.4GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
10.999.3GSM314268tissue type: seedling, leaf - rep3GSE12508Transcription patterns during wheat development
10.799.2GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
10.299.2GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
9.099.0GSM298056Leaf tissue of Harnesk at 5 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
8.698.9GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.598.9GSM298089Leaf tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
8.498.9GSM298080Leaf tissue of Solstice at 5 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.592e-85315TaAffx.26385.1.S1_x_atCA689363--4e+0At5g25090plastocyanin-like domain-containing proteinC.G.S.X.
0.592e-85315TaAffx.26385.1.S1_atCA689363--4e+0At5g25090plastocyanin-like domain-containing proteinC.G.S.X.
0.453e-78291Ta.2752.2.S1_x_atBE216923--6e-13At1g67090RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)C.G.S.X.
0.605e-77287TaAffx.28584.1.S1_x_atCA658565--4e+0At5g48485DIR1 (DEFECTIVE IN INDUCED RESISTANCE 1)C.G.S.X.
0.442e-51202Ta.2752.3.S1_x_atBJ266715ribulosebisphosphate carboxylase small subunit-8e-12At1g67090RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)C.G.S.X.
0.603e-47188TaAffx.7515.1.S1_atCA657572--4e+0At5g48485DIR1 (DEFECTIVE IN INDUCED RESISTANCE 1)C.G.S.X.
0.233e-35149Ta.27923.2.S1_x_atCK212552small subunit-3e-14At1g67090RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)C.G.S.X.
0.292e-26119TaAffx.109620.1.S1_atCA672181--2e+1At5g39470F-box family proteinC.G.S.X.
0.234e-22105TaAffx.109168.1.S1_atCA679232--1e+0At3g03150unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.063e-136Arabidopsis thalianaAt1g67090843029RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)F:ribulose-bisphosphate carboxylase activity, copper ion binding;P:response to blue light, response to cold, carbon utilization by fixation of carbon dioxide, response to red light, response to far red light;C:in 10 components;POB---C.G.S.X.
0.044e-136Glycine maxGma.289.1.S1_x_atAF303941.1ribulose-1,5-bisphosphate carboxylase small subunit rbcS2 /// ribulose-1,5-bisphosphate carboxylase small subunit /// ribulose-1,5-bisphosphate carboxylase small subunit-7e-34At1g67090RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)C.G.S.X.
0.413e-61234Hordeum vulgareContig859_s_atContig859--7e-16At1g67090RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)C.G.S.X.
0.203e-30133Oryza sativaOs12g0291400CB682251-Ribulose-1,5-bisphosphate carboxylase/oxygenasesmall subunit (Fragment)4e-5At5g38410ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)C.G.S.X.
0.046e+032Populus trichocarpaPtpAffx.29160.1.A1_atDN486624--3e+0At2g33130RALFL18 (ralf-like 18)C.G.S.X.
0.045e+030Vitis vinifera1615887_atCA812335--3e+1At5g25450ubiquinol-cytochrome C reductase complex 14 kDa protein, putativeC.G.S.X.
0.131e-446Zea maysZm.6763.1.S1_atD00170.1ribulose bisphosphate carboxylase small subunit1-2e-3At1g67090RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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