CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID TaAffx.108170.4.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.93 98.7 TaAffx.108170.4.S1_at CA689645 - - 2e+1 At3g17609 HYH (HY5-HOMOLOG) S.X. H.G.
0.68 86.5 TaAffx.91452.1.S1_at CA610840 - - 2e+1 At5g54360 zinc finger (C2H2 type) family protein-related S.X. H.G.
0.64 83.6 TaAffx.30005.1.S1_at CA630801 - - 1e+0 At4g00840 zinc ion binding S.X. H.G.
0.59 79.8 TaAffx.7150.1.S1_at CA667568 - - 4e+0 At5g61270 PIF7 (PHYTOCHROME-INTERACTING FACTOR7) S.X. H.G.
0.48 69.0 TaAffx.29234.1.S1_x_at CA647550 - - 7e-1 At5g11920 AtcwINV6 (6-&1-fructan exohydrolase) S.X. H.G.
0.45 65.2 TaAffx.95641.1.S1_at CA620605 - - 3e-7 At5g23950 C2 domain-containing protein S.X. H.G.
0.44 64.5 TaAffx.110179.1.S1_at CA662677 - - 3e-8 At5g16340 AMP-binding protein, putative S.X. H.G.
0.44 64.5 TaAffx.114317.1.S1_at CA595026 - - 7e-2 At1g64200 VHA-E3 (VACUOLAR H+-ATPASE SUBUNIT E ISOFORM 3) S.X. H.G.
0.43 62.2 TaAffx.51913.1.S1_x_at CA716536 - - 8e-1 At5g56110 ATMYB103 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 103) S.X. H.G.
0.41 59.6 TaAffx.112720.1.S1_at CA621571 - - 7e-5 At5g39580 peroxidase, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
57.1 99.9 GSM298070 Leaf tissue of Paragon at 9 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
30.2 99.8 GSM250900 TcLr34_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
26.1 99.8 GSM298092 Crown tissue of Solstice at 3 weeks post germination GSE11774 Expression data from cold treated wheat cultivars
13.6 99.5 GSM250897 TcLr1_3dpi_mock_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
12.9 99.4 GSM298090 Leaf tissue of Solstice at 5 weeks post germination GSE11774 Expression data from cold treated wheat cultivars
9.2 99.0 GSM250895 Tc_3dpi_mock_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
9.2 99.0 GSM298067 Leaf tissue of Paragon at 5 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
8.8 98.9 GSM298089 Leaf tissue of Solstice at 3 weeks post germination GSE11774 Expression data from cold treated wheat cultivars
8.0 98.8 GSM250899 TcLr34_3dpi_mock_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.9 98.7 GSM250898 TcLr1_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.44 8e-88 323 TaAffx.108170.2.S1_at CA659279 - - 2e+1 At4g35980 unknown protein C.G. S.X.
0.54 2e-79 295 TaAffx.108170.5.S1_at CA682353 - - 9e-1 At4g05080 F-box family protein C.G. S.X.
0.39 2e-39 163 Ta.30731.3.S1_x_at CA679736 - - 2e+1 At5g35900 LBD35 (LOB DOMAIN-CONTAINING PROTEIN 35) C.G. S.X.
0.39 2e-39 163 Ta.30731.3.S1_at CA679736 - - 2e+1 At5g35900 LBD35 (LOB DOMAIN-CONTAINING PROTEIN 35) C.G. S.X.
0.38 2e-35 149 Ta.30731.2.S1_at CA661214 - - 2e+1 At4g16160 mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein C.G. S.X.
0.38 2e-35 149 Ta.30731.2.S1_x_at CA661214 - - 2e+1 At4g16160 mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein C.G. S.X.
0.19 6e-27 121 Ta.30731.1.S1_at CD876318 - - 3e-3 At5g12890 UDP-glucoronosyl/UDP-glucosyl transferase family protein C.G. S.X.
0.18 1e-12 73 TaAffx.75937.1.S1_at BG905833 - - 2e+1 At5g62750 unknown protein C.G. S.X.
0.03 1e+0 34 Ta.8694.1.A1_x_at BJ228773 - - 3e-1 At2g29960 CYP5 (CYCLOPHILIN 5) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 2e+1 30 Arabidopsis thaliana At3g17609 821027 HYH (HY5-HOMOLOG) F:transcription factor activity, DNA binding;P:response to UV-B, anthocyanin metabolic process, regulation of transcription, DNA-dependent;C:nucleus;MPFO - - - C.G. S.X.
0.02 5e+0 32 Glycine max PsAffx.C266000001_at PsAffx.C266000001 - - 7e+0 At3g13980 unknown protein C.G. S.X.
0.16 3e-14 77 Hordeum vulgare Contig22671_at Contig22671 - - 2e+0 At2g38450 - C.G. S.X.
0.14 2e-9 63 Oryza sativa Os05g0500100 9633.m03949 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 2e+0 At3g22560 GCN5-related N-acetyltransferase (GNAT) family protein C.G. S.X.
0.04 5e+0 32 Populus trichocarpa PtpAffx.48364.1.S1_at DN486423 - - 3e-2 At2g07815 unknown protein C.G. S.X.
0.04 1e+0 32 Vitis vinifera 1618952_at CF405185 - - 7e-1 At4g18890 brassinosteroid signalling positive regulator-related C.G. S.X.
0.04 4e-1 34 Zea mays ZmAffx.597.1.A1_at AI715025 - - 8e-1 At1g43260 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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