Gene omics information

Query gene ID TaAffx.108107.3.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7188.0TaAffx.108107.3.S1_atCA714538--4e+0At1g51950IAA18 (INDOLE-3-ACETIC ACID INDUCIBLE 18)S.X.H.G.
0.8393.4TaAffx.56013.1.S1_atCA658531--6e-1At5g38410ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)S.X.H.G.
0.7790.8TaAffx.108219.1.S1_atCA690622--3e-1At1g67090RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)S.X.H.G.
0.7188.0Ta.1977.2.A1_atBE231484--1e+0At3g07430emb1990 (embryo defective 1990)S.X.H.G.
0.6786.3TaAffx.39457.1.A1_atBG904975--2e+0Atmg00850-S.X.H.G.
0.5779.2TaAffx.26385.1.S1_x_atCA689363--4e+0At5g25090plastocyanin-like domain-containing proteinS.X.H.G.
0.4767.9TaAffx.26385.1.S1_atCA689363--4e+0At5g25090plastocyanin-like domain-containing proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
33.699.9GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
21.199.7GSM298069Leaf tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
16.899.6GSM298090Leaf tissue of Solstice at 5 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
11.299.3GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
9.699.1GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
9.099.0GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.898.9GSM298066Leaf tissue of Paragon at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
8.698.9GSM298068Leaf tissue of Paragon at 5 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
7.698.7GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.398.6GSM298089Leaf tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.000854TaAffx.108107.3.S1_x_atCA714538--4e+0At1g51950IAA18 (INDOLE-3-ACETIC ACID INDUCIBLE 18)C.G.S.X.
0.192e-38159TaAffx.108107.2.S1_atCA655853--4e+0At3g06020unknown proteinC.G.S.X.
0.162e-1479Ta.22871.1.S1_s_atU86762.1gamma-type tonoplast intrinsic protein-3e-3At2g36830GAMMA-TIP (GAMMA TONOPLAST INTRINSIC PROTEIN)C.G.S.X.
0.171e-1273Ta.27751.3.S1_atCK211496--4e-10At4g12800PSAL (photosystem I subunit L)C.G.S.X.
0.171e-1273Ta.27751.3.S1_x_atCK211496--4e-10At4g12800PSAL (photosystem I subunit L)C.G.S.X.
0.042e-136TaAffx.53143.1.S1_atCA696095--1e+1At4g20440smB (small nuclear ribonucleoprotein associated protein B)C.G.S.X.
0.034e+032TaAffx.97225.1.S1_atCA595514--3e-1At2g25770unknown proteinC.G.S.X.
0.034e+032TaAffx.8672.1.S1_atCA621765--1e-3At1g3624060S ribosomal protein L30 (RPL30A)C.G.S.X.
0.024e+032TaAffx.64586.1.S1_atBJ296725--4e-20At4g33460ATNAP13C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.034e+032Arabidopsis thalianaAt1g51950841623IAA18 (INDOLE-3-ACETIC ACID INDUCIBLE 18)F:transcription factor activity;P:response to auxin stimulus;C:nucleus;P---C.G.S.X.
0.045e+032Glycine maxGmaAffx.50860.1.S1_atBM121556--8e-1At1g02780emb2386 (embryo defective 2386)C.G.S.X.
0.393e-30131Hordeum vulgareContig2177_atContig2177--6e-10At4g12800PSAL (photosystem I subunit L)C.G.S.X.
0.093e-859Oryza sativaOs12g0420400BM420353-Photosystem I reaction center subunit XI,chloroplast precursor (PSI- L) (PSI subunit V)4e+0At4g12800PSAL (photosystem I subunit L)C.G.S.X.
0.045e+032Populus trichocarpaPtpAffx.202682.1.S1_atpmrna5351hypothetical protein-2e-16At1g48140dolichol-phosphate mannosyltransferase-relatedC.G.S.X.
0.041e+032Vitis vinifera1611211_atCF6031963-deoxy-D-arabino-heptulosonate-7-phosphate synthase-3e-10At1g224102-dehydro-3-deoxyphosphoheptonate aldolase, putative / 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, putative / DAHP synthetase, putativeC.G.S.X.
0.062e-342Zea maysZm.16853.1.A1_atAY103985.1--2e-18At5g05920DHS (DEOXYHYPUSINE SYNTHASE)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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