Gene omics information

Query gene ID	TaAffx.108096.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.45	65.2	TaAffx.108096.1.S1_at	CA659463	-	-	4e+0	At2g18010	auxin-responsive family protein	S.X.	H.G.	Please select
0.40	58.4	TaAffx.108170.4.S1_at	CA689645	-	-	2e+1	At3g17609	HYH (HY5-HOMOLOG)	S.X.	H.G.	Please select
0.38	54.7	TaAffx.30708.1.S1_at	CA622731	-	-	2e-7	At4g01480	AtPPa5 (Arabidopsis thaliana pyrophosphorylase 5)	S.X.	H.G.	Please select
0.31	42.7	TaAffx.113098.1.S1_at	CA618075	-	-	1e+0	At2g27130	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	S.X.	H.G.	Please select
0.31	42.7	TaAffx.95641.1.S1_at	CA620605	-	-	3e-7	At5g23950	C2 domain-containing protein	S.X.	H.G.	Please select
0.29	39.2	TaAffx.110179.1.S1_at	CA662677	-	-	3e-8	At5g16340	AMP-binding protein, putative	S.X.	H.G.	Please select
0.22	27.1	TaAffx.27272.1.S1_at	CA678926	-	-	4e+0	At5g20165	unknown protein	S.X.	H.G.	Please select
0.21	25.5	TaAffx.51913.1.S1_x_at	CA716536	-	-	8e-1	At5g56110	ATMYB103 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 103)	S.X.	H.G.	Please select
0.09	10.4	TaAffx.112720.1.S1_x_at	CA621571	-	-	7e-5	At5g39580	peroxidase, putative	S.X.	H.G.	Please select
0.07	8.6	TaAffx.121220.2.S1_at	CA677165	Harpin binding protein 1	-	4e+0	At5g50030	invertase/pectin methylesterase inhibitor family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
62.6	99.9	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
35.1	99.9	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
10.8	99.2	GSM143507	Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
6.9	98.4	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.1	98.1	GSM143506	Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
6.0	98.0	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.9	98.0	GSM250894	TcLr34_3dpi_inoculated_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.7	97.9	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.0	97.4	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.9	97.3	GSM138210	genotype B65 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.33	1e-52	206	Ta.5834.2.S1_at	CK206721	-	-	1e-3	At3g26430	GDSL-motif lipase/hydrolase family protein	C.G.	S.X.	Please select
0.33	1e-52	206	Ta.5834.2.S1_a_at	CK206721	-	-	1e-3	At3g26430	GDSL-motif lipase/hydrolase family protein	C.G.	S.X.	Please select
0.31	9e-20	97	Ta.5834.3.S1_x_at	CA716909	-	-	4e+0	At3g62280	carboxylesterase/ hydrolase, acting on ester bonds	C.G.	S.X.	Please select
0.31	9e-20	97	Ta.5834.3.S1_at	CA716909	-	-	4e+0	At3g62280	carboxylesterase/ hydrolase, acting on ester bonds	C.G.	S.X.	Please select
0.13	2e-5	50	TaAffx.106640.1.S1_at	CA714395	-	-	3e+0	At5g47700	60S acidic ribosomal protein P1 (RPP1C)	C.G.	S.X.	Please select
0.03	2e-5	50	Ta.4811.1.S1_x_at	BJ229035	-	-	1e-2	At1g28590	lipase, putative	C.G.	S.X.	Please select
0.07	7e-5	48	TaAffx.29969.1.S1_s_at	CA631452	-	-	1e+0	At3g26430	GDSL-motif lipase/hydrolase family protein	C.G.	S.X.	Please select
0.07	7e-5	48	Ta.21925.1.S1_at	CD905060	-	-	3e-3	At1g67830	ATFXG1 (alpha-fucosidase 1)	C.G.	S.X.	Please select
0.05	5e-3	42	Ta.25272.1.S1_at	CA680512	-	-	7e-1	At3g05180	GDSL-motif lipase/hydrolase family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	4e+0	32	Arabidopsis thaliana	At2g18010	816313	auxin-responsive family protein	F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.07	4e-1	36	Glycine max	GmaAffx.37458.2.S1_at	BQ079820	-	-	5e-15	At1g67830	ATFXG1 (alpha-fucosidase 1)	C.G.	S.X.	Please select
0.29	3e-61	234	Hordeum vulgare	Contig1403_at	Contig1403	-	-	1e-2	At3g26430	GDSL-motif lipase/hydrolase family protein	C.G.	S.X.	Please select
0.13	4e-17	89	Oryza sativa	Os07g0586100	AK071404.1	-	Esterase precursor (EC 3.1.1.-) (Earlynodule-specific protein homolog) (Latex allergen Hev b13)	1e-8	At3g26430	GDSL-motif lipase/hydrolase family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	6e+0	32	Populus trichocarpa	PtpAffx.61543.1.A1_at	BP929843	hypothetical protein	-	3e-10	At1g16880	uridylyltransferase-related	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	3e-1	34	Vitis vinifera	1607208_at	CF206329.1	-	-	1e-21	At1g16880	uridylyltransferase-related	C.G.	S.X.	Please select
0.07	8e-9	59	Zea mays	Zm.18541.1.S1_at	CO528387	hypothetical protein ache	-	3e-3	At3g26430	GDSL-motif lipase/hydrolase family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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