CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID TaAffx.107958.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.89 94.6 TaAffx.107958.1.S1_at CA692856 - - 5e-2 At4g15790 unknown protein S.X. H.G.
0.88 94.4 Ta.22617.1.S1_at CA689673 - - 4e+0 At3g02493 RTFL19 (ROTUNDIFOLIA LIKE 19) S.X. H.G.
0.88 94.4 Ta.14866.1.S1_at CA683420 - - 2e+0 At2g45130 SPX3 (SPX DOMAIN GENE 3) S.X. H.G.
0.86 94.1 TaAffx.26066.1.S1_at CA684631 - - 1e-9 At3g23390 60S ribosomal protein L36a/L44 (RPL36aA) S.X. H.G.
0.85 93.8 TaAffx.53511.1.S1_at CA683468 - - 9e-2 At4g13170 60S ribosomal protein L13A (RPL13aC) S.X. H.G.
0.81 92.4 Ta.15068.1.S1_at CA688612 - - 1e+1 At5g48350 nucleic acid binding S.X. H.G.
0.79 91.3 Ta.22627.1.S1_at CA685256 - - 2e-9 At1g67430 60S ribosomal protein L17 (RPL17B) S.X. H.G.
0.79 91.3 Ta.15200.1.A1_at CA693274 - - 5e-2 At5g59400 unknown protein S.X. H.G.
0.77 90.8 Ta.14846.1.S1_at CA683077 - - 2e+0 At5g41450 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.76 90.1 TaAffx.108039.1.S1_at CA692181 - - 1e+1 At4g29273 LCR23 (Low-molecular-weight cysteine-rich 23) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
184.8 100.0 GSM324488 Si- B+ rep2 GSE12936 Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
164.6 100.0 GSM324487 Si- B+ rep1 GSE12936 Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
14.1 99.5 GSM324489 Si- B+ rep3 GSE12936 Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
1.7 87.1 GSM324486 Si- B- rep3 GSE12936 Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
1.5 84.9 GSM324494 Si+ B+ rep2 GSE12936 Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
0.3 52.1 GSM324484 Si- B- rep1 GSE12936 Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
0.2 46.5 GSM324485 Si- B- rep2 GSE12936 Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
0.2 46.5 GSM324493 Si+ B+ rep1 GSE12936 Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
0.1 39.8 GSM324495 Si+ B+ rep3 GSE12936 Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
0.0 30.7 GSM138210 genotype B65 developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 2e-7 56 TaAffx.26112.1.S1_at CA691838 - - 4e+0 At1g72430 auxin-responsive protein-related C.G. S.X.
0.05 9e-7 54 TaAffx.52885.1.S1_at CA699392 - - 2e+1 At5g22180 unknown protein C.G. S.X.
0.06 9e-7 54 TaAffx.26067.1.S1_at CA692371 - - 4e+0 At3g12460 3'-5' exonuclease/ nucleic acid binding C.G. S.X.
0.06 9e-7 54 TaAffx.122663.1.S1_at CA598319 - - 2e-4 At1g12665 - C.G. S.X.
0.04 9e-7 54 TaAffx.111376.1.S1_at BQ801457 - - 7e+0 At5g42060 unknown protein C.G. S.X.
0.08 9e-7 54 Ta.16085.1.S1_at CA597973 - - 4e-1 At2g16600 ROC3 C.G. S.X.
0.07 4e-6 52 TaAffx.80952.1.S1_at CA690824 - - 7e-1 At5g59870 HTA6 C.G. S.X.
0.05 4e-6 52 TaAffx.38095.1.S1_at BJ250364 - - 5e+0 At3g50410 OBP1 (OBF BINDING PROTEIN 1) C.G. S.X.
0.06 4e-6 52 TaAffx.26615.1.S1_at CA687136 - - 1e+1 At5g23640 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 5e-2 38 Arabidopsis thaliana At4g15790 827259 unknown protein F:unknown;P:biological_process unknown;C:chloroplast;OMBPFA - - - C.G. S.X.
0.06 1e-6 54 Glycine max Gma.7013.4.S1_a_at BF424796 - - 2e-4 At5g20090 unknown protein C.G. S.X.
0.06 7e-6 50 Hordeum vulgare HVSMEh0094M14f_s_at HVSMEh0094M14f - - 2e-1 At4g21215 unknown protein C.G. S.X.
0.04 2e-3 44 Oryza sativa Os05g0202800 AF009959.1 - Plant metallothionein, family 15 protein 3e-7 At3g15353 MT3 (METALLOTHIONEIN 3) C.G. S.X.
0.07 2e-5 50 Populus trichocarpa PtpAffx.134289.1.A1_at CV240617 - - 2e+0 At5g14360 ubiquitin family protein C.G. S.X.
0.04 2e-5 48 Vitis vinifera 1617182_at CB921793 - - 5e-3 At1g62240 unknown protein C.G. S.X.
0.05 6e-6 50 Zea mays Zm.3801.2.A1_at AY112091.1 - - 1e+0 At4g01590 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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