Gene omics information

Query gene ID	TaAffx.107179.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.40	58.4	TaAffx.107179.1.S1_at	CA704854	-	-	8e-1	At3g60760	unknown protein	S.X.	H.G.	Please select
0.80	92.2	TaAffx.77881.1.S1_at	CA741326	-	-	2e+1	Atcg00065	-	S.X.	H.G.	Please select
0.57	79.2	TaAffx.107754.1.S1_at	CD876350	-	-	1e+0	At2g21780	unknown protein	S.X.	H.G.	Please select
0.53	74.9	Ta.30411.1.S1_at	CK209297	-	-	5e+0	At5g62280	unknown protein	S.X.	H.G.	Please select
0.50	72.4	TaAffx.51594.1.S1_at	CA723204	-	-	1e+0	At3g51810	EM1 (LATE EMBRYOGENESIS ABUNDANT 1)	S.X.	H.G.	Please select
0.50	72.4	TaAffx.73323.1.S1_at	CA713945	-	-	3e+0	At5g45870	Bet v I allergen family protein	S.X.	H.G.	Please select
0.37	53.0	TaAffx.118620.1.S1_at	BJ316617	-	-	1e+0	At2g31560	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
35.1	99.9	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
22.3	99.8	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
19.7	99.7	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
15.3	99.6	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
10.5	99.2	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.3	98.8	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.4	96.8	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.3	96.7	GSM250908	Tc_7dpi_inoculated_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.6	95.6	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.5	95.4	GSM298079	Leaf tissue of Solstice at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.16	4e-9	61	TaAffx.106388.1.S1_at	CA719418	-	-	1e-6	At5g46020	unknown protein	C.G.	S.X.	Please select
0.24	6e-8	57	Ta.12148.1.S1_a_at	BQ171689	-	-	3e-2	At1g61050	alpha 1,4-glycosyltransferase family protein / glycosyltransferase sugar-binding DXD motif-containing protein	C.G.	S.X.	Please select
0.24	6e-8	57	Ta.12148.1.S1_x_at	BQ171689	-	-	3e-2	At1g61050	alpha 1,4-glycosyltransferase family protein / glycosyltransferase sugar-binding DXD motif-containing protein	C.G.	S.X.	Please select
0.12	4e-3	42	Ta.12148.2.A1_x_at	BJ253783	-	-	1e+0	At4g16447	unknown protein	C.G.	S.X.	Please select
0.02	2e-1	36	Ta.27945.1.S1_x_at	CK216098	-	-	3e-3	At5g23360	GRAM domain-containing protein / ABA-responsive protein-related	C.G.	S.X.	Please select
0.04	9e-1	34	TaAffx.51527.1.S1_at	CA723940	-	-	4e+0	At1g44191	-	C.G.	S.X.	Please select
0.03	9e-1	34	TaAffx.51333.1.S1_at	BJ257232	-	-	1e+0	At5g63040	unknown protein	C.G.	S.X.	Please select
0.03	9e-1	34	Ta.26902.1.S1_at	CD454770	-	-	1e-1	At1g24625	ZFP7 (ZINC FINGER PROTEIN 7)	C.G.	S.X.	Please select
0.02	9e-1	34	Ta.24760.1.S1_at	AY485121.1	-	-	6e-11	At2g37640	EXP3	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	8e-1	34	Arabidopsis thaliana	At3g60760	825247	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	1e+0	34	Glycine max	Gma.5371.1.S1_at	BM093790	-	-	9e-7	At3g16570	RALFL23 (ralf-like 23)	C.G.	S.X.	Please select
0.04	2e+0	32	Hordeum vulgare	HY02G07u_at	HY02G07u	-	-	4e+0	At2g28420	lactoylglutathione lyase family protein / glyoxalase I family protein	C.G.	S.X.	Please select
0.06	2e+0	34	Oryza sativa	Os04g0579600	9632.m04759	-	-	7e-2	At1g47210	cyclin family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	2e+1	30	Populus trichocarpa	PtpAffx.223733.1.S1_x_at	pmrna41882	hypothetical protein	-	0	Atcg01250	-	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	4e+0	30	Vitis vinifera	1616127_at	CD798384	hypothetical protein LOC100267335	-	4e+0	At5g17847	unknown protein	C.G.	S.X.	Please select
0.04	4e-1	34	Zea mays	Zm.6905.4.S1_a_at	AI881845	Histone H1-like protein	-	2e-1	At1g07980	NF-YC10 (NUCLEAR FACTOR Y, SUBUNIT C10)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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