Gene omics information

Query gene ID	TaAffx.107156.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.83	93.4	TaAffx.107156.1.S1_at	CA705156	-	-	8e-1	At2g31670	-	S.X.	H.G.	Please select
0.60	81.0	TaAffx.132743.1.S2_at	CA682115	-	-	1e-15	Atcg00070	-	S.X.	H.G.	Please select
0.55	76.8	TaAffx.4544.1.S1_at	CA742649	-	-	2e-36	Atcg01040	-	S.X.	H.G.	Please select
0.29	39.2	TaAffx.5832.1.S1_at	CA697645	-	-	7e-75	Atcg00190	-	S.X.	H.G.	Please select
0.29	39.2	TaAffx.134856.3.S1_s_at	CA668590	-	-	4e+0	At5g51460	ATTPPA	S.X.	H.G.	Please select
0.25	32.1	TaAffx.54024.1.S1_at	CA686681	-	-	2e-2	At3g42310	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
260.2	100.0	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
4.9	97.3	GSM324493	Si+ B+ rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
4.8	97.2	GSM315202	target strand labeled: Sense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
3.5	95.4	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
3.2	94.8	GSM343685	Wheat var. Kennedy_control_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
3.2	94.8	GSM343678	Wheat var. Kennedy_control_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
2.4	92.0	GSM324485	Si- B- rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
2.4	92.0	GSM324492	Si+ B- rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
2.2	91.0	GSM143495	Jupateco_Lr34 (resistant), mock inoculated distal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
2.1	90.3	GSM314281	tissue type: 3-5 DAP caryopsis - rep1	GSE12508	Transcription patterns during wheat development

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.08	2e-11	69	TaAffx.12298.1.A1_at	BJ273401	-	-	4e+0	At5g28950	unknown protein	C.G.	S.X.	Please select
0.03	3e+0	32	TaAffx.109275.1.S1_at	CA677633	-	-	4e+0	At3g18760	ribosomal protein S6 family protein	C.G.	S.X.	Please select
0.04	3e+0	32	Ta.7772.2.S1_a_at	CA737156	-	-	2e-7	At2g43770	transducin family protein / WD-40 repeat family protein	C.G.	S.X.	Please select
0.02	3e+0	32	Ta.7772.1.S1_at	CA743341	-	-	4e-15	At2g43770	transducin family protein / WD-40 repeat family protein	C.G.	S.X.	Please select
0.03	1e+1	30	TaAffx.9089.1.S1_at	CA612906	-	-	1e+0	At2g47520	AP2 domain-containing transcription factor, putative	C.G.	S.X.	Please select
0.03	1e+1	30	TaAffx.54637.1.S1_at	CA678965	-	-	2e+1	At2g18876	unknown protein	C.G.	S.X.	Please select
0.03	1e+1	30	TaAffx.53767.1.S1_at	CA689371	-	-	2e+1	At5g46970	invertase/pectin methylesterase inhibitor family protein	C.G.	S.X.	Please select
0.03	1e+1	30	TaAffx.51238.1.S1_at	CA728913	-	-	4e+0	At1g77400	-	C.G.	S.X.	Please select
0.03	1e+1	30	TaAffx.26876.1.S1_at	CA683776	-	-	4e+0	At3g25580	thioredoxin-related	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	8e-1	34	Arabidopsis thaliana	At2g31670	817723	-	F:molecular_function unknown;P:biological_process unknown;C:peroxisome, chloroplast stroma, chloroplast;PBOF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.18	7e-36	151	Glycine max	GmaAffx.50434.1.S1_at	BI943584	-	-	8e-1	At3g06110	MKP2 (MAPK PHOSPHATASE 2)	C.G.	S.X.	Please select
0.77	9e-178	621	Hordeum vulgare	HVSMEc0013C02f_at	HVSMEc0013C02f	-	-	4e+0	At4g33666	unknown protein	C.G.	S.X.	Please select
0.36	7e-83	307	Oryza sativa	Os.26596.1.S1_s_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.34	1e-37	157	Populus trichocarpa	PtpAffx.217430.1.S1_s_at	pmrna32684	hypothetical protein	-	5e+0	At4g02520	ATGSTF2 (GLUTATHIONE S-TRANSFERASE PHI 2)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.11	2e-14	77	Vitis vinifera	1615308_at	CD004852	-	-	1e+0	At2g41530	SFGH (S-FORMYLGLUTATHIONE HYDROLASE)	C.G.	S.X.	Please select
0.08	6e-12	69	Zea mays	ZmAffx.1373.1.S1_at	40794996-161	-	-	2e-1	At1g36340	UBC31 (ubiquitin-conjugating enzyme 31)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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