Gene omics information

Query gene ID	TaAffx.106823.1.S1_x_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.36	51.9	TaAffx.106823.1.S1_x_at	CA710938	-	-	4e+0	At5g55570	unknown protein	S.X.	H.G.	Please select
0.86	94.1	Ta.14479.3.S1_x_at	CA630294	-	-	7e-18	At2g05830	eukaryotic translation initiation factor 2B family protein / eIF-2B family protein	S.X.	H.G.	Please select
0.53	74.9	Ta.3083.2.A1_at	BJ254365	-	-	4e+0	At3g05602	unknown protein	S.X.	H.G.	Please select
0.52	73.7	Ta.3478.3.S1_x_at	CA637826	-	-	2e-11	At1g69670	CUL3B (CULLIN 3B)	S.X.	H.G.	Please select
0.47	67.9	Ta.14146.3.S1_x_at	CA697368	-	-	2e+1	At5g24313	unknown protein	S.X.	H.G.	Please select
0.36	51.9	Ta.2593.3.S1_x_at	CA665053	-	-	4e-1	At4g23980	ARF9 (AUXIN RESPONSE FACTOR 9)	S.X.	H.G.	Please select
0.30	40.9	TaAffx.25126.1.S1_at	CA705922	-	-	3e+0	At3g17460	PHD finger family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
21.0	99.7	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
15.4	99.6	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
10.7	99.2	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.2	97.5	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
4.2	96.6	GSM138145	Genotype RL4452 developing seed at 5 days after anthesis, biological rep3 location SB	GSE5937	Wheat expression level polymorphism study parental genotypes 2 biological reps from SB location
3.9	96.1	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.9	96.1	GSM138210	genotype B65 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.5	95.4	GSM298069	Leaf tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.2	94.8	GSM298086	Crown tissue of Solstice at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.2	94.8	GSM138205	genotype H8 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
1.00	0	912	TaAffx.106823.1.S1_at	CA710938	-	-	4e+0	At5g55570	unknown protein	C.G.	S.X.	Please select
0.50	2e-134	478	Ta.8965.3.S1_at	CF182122	-	-	6e+0	At4g33560	unknown protein	C.G.	S.X.	Please select
0.52	4e-71	268	TaAffx.24426.1.S1_at	CA719619	-	-	3e+0	At5g44430	PDF1.2c (plant defensin 1.2c)	C.G.	S.X.	Please select
0.08	5e-24	111	Ta.8965.1.S1_a_at	BJ319766	-	-	2e+0	At1g68490	unknown protein	C.G.	S.X.	Please select
0.08	5e-24	111	Ta.8965.1.S1_at	BJ319766	-	-	2e+0	At1g68490	unknown protein	C.G.	S.X.	Please select
0.22	1e-18	93	Ta.6811.1.A1_at	BJ305730	-	-	1e+0	At5g19729	unknown protein	C.G.	S.X.	Please select
0.04	1e-3	44	TaAffx.26888.1.S1_at	CA683641	-	-	4e+0	At5g60490	FLA12	C.G.	S.X.	Please select
0.04	4e-3	42	TaAffx.110493.1.S1_x_at	CA658450	-	-	4e-3	At5g47310	unknown protein	C.G.	S.X.	Please select
0.04	4e-3	42	TaAffx.110493.1.S1_s_at	CA658450	-	-	4e-3	At5g47310	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	4e+0	32	Arabidopsis thaliana	At5g55570	835651	unknown protein	F:unknown;P:unknown;C:chloroplast;PM	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	3e-1	36	Glycine max	Gma.6082.1.S1_at	BQ611389	-	-	3e+0	At5g59990	-	C.G.	S.X.	Please select
0.04	3e-2	38	Hordeum vulgare	HVSMEc0004G20r2_at	HVSMEc0004G20r2	-	-	1e+1	At5g28610	-	C.G.	S.X.	Please select
0.05	5e-4	46	Oryza sativa	Os02g0559800	AB045120.1	-	Zn-finger, RING domain containing protein	6e-1	At4g24026	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	1e+0	34	Populus trichocarpa	PtpAffx.210789.1.S1_at	pmrna21167	hypothetical protein	-	9e-1	At1g50020	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	1e+0	32	Vitis vinifera	1615135_at	CD797887	-	-	1e+1	At5g41992	CPuORF58 (Conserved peptide upstream open reading frame 58)	C.G.	S.X.	Please select
0.03	3e-2	38	Zea mays	Zm.17728.1.A1_at	CF631523	-	-	1e+0	At3g25573	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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