Gene omics information

Query gene ID	TaAffx.106711.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.96	99.3	TaAffx.106711.1.S1_at	CA713161	-	-	1e+1	Atmg01140	-	S.X.	H.G.	Please select
0.38	54.7	Ta.4721.1.S1_at	BJ240050	-	-	9e-7	At5g10470	kinesin motor protein-related	S.X.	H.G.	Please select
0.37	53.0	Ta.17076.2.S1_x_at	BQ789183	-	-	1e+0	At5g64310	AGP1 (ARABINOGALACTAN PROTEIN 1)	S.X.	H.G.	Please select
0.34	48.1	TaAffx.94031.1.A1_at	BG907287	-	-	8e-1	At5g23480	DNA binding	S.X.	H.G.	Please select
0.34	48.1	Ta.12807.1.S1_at	AJ609693	-	-	7e+0	At1g03600	photosystem II family protein	S.X.	H.G.	Please select
0.33	46.9	Ta.4390.1.S1_at	CK156263	-	-	4e-1	At1g04445	zinc finger (C2H2 type) family protein	S.X.	H.G.	Please select
0.29	39.2	Ta.4572.1.S1_a_at	BJ268136	-	-	1e-1	At1g14300	binding	S.X.	H.G.	Please select
0.29	39.2	Ta.27511.1.S1_at	BT009220.1	-	-	2e+0	At5g23480	DNA binding	S.X.	H.G.	Please select
0.29	39.2	Ta.7012.3.A1_x_at	CA674682	-	-	8e-2	At1g79870	oxidoreductase family protein	S.X.	H.G.	Please select
0.28	39.2	TaAffx.111726.1.S1_s_at	CA634717	-	-	4e+0	At5g55570	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
26.3	99.8	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
6.2	98.1	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.0	98.0	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.7	97.9	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.6	97.0	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.3	96.7	GSM324484	Si- B- rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
4.0	96.3	GSM324492	Si+ B- rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
4.0	96.3	GSM343687	Wheat var. Kennedy_Fp inoculated_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
3.9	96.1	GSM324495	Si+ B+ rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
3.9	96.1	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	1e-2	40	TaAffx.119986.1.S1_at	BJ249181	-	-	3e-1	At4g16240	unknown protein	C.G.	S.X.	Please select
0.03	4e-2	38	Ta.29528.1.S1_s_at	CK211691	-	-	8e+0	At5g41614	unknown protein	C.G.	S.X.	Please select
0.04	4e-2	38	Ta.28262.3.S1_at	CA664460	-	-	4e+0	At5g41614	unknown protein	C.G.	S.X.	Please select
0.03	4e-2	38	Ta.28262.1.S1_at	CA643249	-	-	7e+0	At5g41614	unknown protein	C.G.	S.X.	Please select
0.04	6e-1	34	TaAffx.9022.1.S1_at	CA615968	-	-	3e+0	At1g68480	JAG (JAGGED)	C.G.	S.X.	Please select
0.04	6e-1	34	TaAffx.12568.2.S1_s_at	BJ237226	-	-	4e+0	At1g45230	defective chloroplasts and leaves protein-related / DCL protein-related	C.G.	S.X.	Please select
0.03	6e-1	34	TaAffx.12568.1.S1_at	BJ253952	-	-	8e+0	At1g45230	defective chloroplasts and leaves protein-related / DCL protein-related	C.G.	S.X.	Please select
0.04	6e-1	34	TaAffx.12568.3.S1_at	CA649670	-	-	3e+0	At1g45230	defective chloroplasts and leaves protein-related / DCL protein-related	C.G.	S.X.	Please select
0.04	3e+0	32	TaAffx.84621.1.S1_at	CA632869	-	-	2e+1	Atmg01140	-	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	1e+1	30	Arabidopsis thaliana	Atmg01140	-	-	hypothetical protein	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	3e+0	32	Glycine max	GmaAffx.82564.2.S1_s_at	BM094990	-	-	8e-1	At3g21970	receptor-like protein kinase-related	C.G.	S.X.	Please select
0.21	2e-30	131	Hordeum vulgare	Contig9837_at	Contig9837	-	-	1e-5	At5g57930	APO2 (ACCUMULATION OF PHOTOSYSTEM ONE 2)	C.G.	S.X.	Please select
0.09	4e-13	75	Oryza sativa	Os02g0732900	AK065796.1	-	Arabidopsis thaliana protein of unknown functionDUF794 family protein	6e-11	At5g57930	APO2 (ACCUMULATION OF PHOTOSYSTEM ONE 2)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	1e+1	30	Populus trichocarpa	PtpAffx.35461.1.S1_at	BU809906	hypothetical protein	-	2e-1	At5g20150	SPX1 (SPX DOMAIN GENE 1)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	1e+1	28	Vitis vinifera	1617493_at	CF415131	-	-	4e-6	At4g24660	ATHB22 (HOMEOBOX PROTEIN 22)	C.G.	S.X.	Please select
0.03	1e+0	32	Zea mays	Zm.10811.7.S1_at	BG837489	Glycine-rich protein	-	7e-3	At4g39260	GR-RBP8	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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