CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID TaAffx.106456.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.2 TaAffx.106456.1.S1_at CA718605 - - 4e+0 At3g05070 - S.X. H.G.
0.03 4.7 Ta.1092.1.S1_at CK210651 - - 6e-26 At5g11900 eukaryotic translation initiation factor SUI1 family protein S.X. H.G.
0.03 4.7 Ta.12680.1.S1_at CD902436 - - 3e-21 At3g05760 nucleic acid binding / zinc ion binding S.X. H.G.
0.02 3.6 TaAffx.119135.1.S1_x_at AJ615948 - - 3e+0 At5g26717 - S.X. H.G.
0.01 2.4 Ta.3506.1.A1_at CK164880 - - 9e-2 At1g05205 unknown protein S.X. H.G.
0.01 2.4 TaAffx.103133.1.S1_at CD883640 - - 2e+0 At2g32310 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
11.9 99.4 GSM138145 Genotype RL4452 developing seed at 5 days after anthesis, biological rep3 location SB GSE5937 Wheat expression level polymorphism study parental genotypes 2 biological reps from SB location
9.4 99.1 GSM139920 Anther diplotene-anaphaseI rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
9.3 99.0 GSM298064 Crown tissue of Harnesk at 9 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
6.7 98.4 GSM111232 genotype H8 developing seed at 5 days after anthesis, biological rep1 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
6.7 98.4 GSM298063 Crown tissue of Harnesk at 9 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
6.4 98.2 GSM314258 tissue type: germinating seed, embryo - rep2 GSE12508 Transcription patterns during wheat development
6.4 98.2 GSM298073 Crown tissue of Paragon at 5 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
6.1 98.1 GSM111185 genotype C22 developing seed at 5 days after anthesis, biological rep2 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
5.2 97.5 GSM111192 genotype F38a developing seed at 5 days after anthesis, biological rep1 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
5.1 97.5 GSM139912 Anther pre-meiosis rep1 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.21 1e-15 83 TaAffx.52929.1.S1_at CA685872 - - 2e+1 At1g48750 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein C.G. S.X.
0.03 3e-1 36 TaAffx.30276.1.S1_at CA626565 - - 1e+0 At4g16500 cysteine protease inhibitor family protein / cystatin family protein C.G. S.X.
0.03 3e-1 36 TaAffx.11250.2.S1_x_at BJ218406 - - 3e-1 At3g24350 SYP32 (SYNTAXIN OF PLANTS 32) C.G. S.X.
0.03 3e-1 36 TaAffx.11250.2.S1_s_at BJ218406 - - 3e-1 At3g24350 SYP32 (SYNTAXIN OF PLANTS 32) C.G. S.X.
0.02 3e-1 36 Ta.28058.1.S1_at CK193812 - - 6e-1 At1g65484 unknown protein C.G. S.X.
0.03 1e+0 34 TaAffx.5447.1.S1_at CA710481 - - 4e+0 At5g03850 40S ribosomal protein S28 (RPS28B) C.G. S.X.
0.03 1e+0 34 TaAffx.46423.1.S1_at BE591255 - - 4e+0 At2g47450 CAO (CHAOS) C.G. S.X.
0.03 1e+0 34 Ta.8630.1.A1_at BQ162148 - - 3e-1 At3g44590 60S acidic ribosomal protein P2 (RPP2D) C.G. S.X.
0.04 1e+0 34 Ta.3880.1.S1_at BJ247918 - - 1e+1 At5g41660 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 4e+0 32 Arabidopsis thaliana At3g05070 819669 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPV - - - C.G. S.X.
0.04 9e-2 38 Glycine max PsAffx.C417000001_at PsAffx.C417000001 - - 3e-1 At1g55130 endomembrane protein 70, putative C.G. S.X.
0.04 3e-2 38 Hordeum vulgare AF474373_CDS-8_at AF474373_CDS-8 - - 1e+0 At5g47630 mtACP3 (mitochondrial acyl carrier protein 3) C.G. S.X.
0.04 2e+0 34 Oryza sativa OsAffx.27712.1.S1_at - - - 0 C.G. S.X.
0.04 4e-1 36 Populus trichocarpa PtpAffx.106448.1.A1_s_at BP934716 - - 8e-4 At2g39410 hydrolase, alpha/beta fold family protein C.G. S.X.
0.03 5e+0 30 Vitis vinifera 1609585_at CF513261 - - 9e-1 At3g59690 IQD13 (IQ-domain 13) C.G. S.X.
0.03 7e+0 30 Zea mays Zm.9667.1.A1_at BM341541 transcription factor MYB42 - 1e+0 At3g48490 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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