CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID TaAffx.106312.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.96 99.3 TaAffx.106312.1.S1_at CA720457 - - 2e+0 At3g16440 ATMLP-300B (MYROSINASE-BINDING PROTEIN-LIKE PROTEIN-300B) S.X. H.G.
0.38 54.7 Ta.7295.3.S1_x_at CA611407 - - 4e-3 At2g23420 NAPRT2 (NICOTINATE PHOSPHORIBOSYLTRANSFERASE 2) S.X. H.G.
0.33 46.9 Ta.3861.1.S1_at BQ162138 - - 2e+0 At5g65870 ATPSK5 (PHYTOSULFOKINE 5 PRECURSOR) S.X. H.G.
0.31 42.7 TaAffx.8043.1.S1_at CA638319 - - 2e+0 At5g49010 SLD5 (SYNTHETIC LETHALITY WITH DPB11-1 5) S.X. H.G.
0.29 39.2 TaAffx.106201.2.S1_s_at CA723284 - - 3e+0 At4g30510 AtATG18b S.X. H.G.
0.29 39.2 Ta.7193.2.S1_at BG904530 - - 3e+0 At2g34690 ACD11 (ACCELERATED CELL DEATH 11) S.X. H.G.
0.29 39.2 TaAffx.117120.1.S1_at BQ608896 - - 4e+0 At1g56700 pyrrolidone-carboxylate peptidase family protein S.X. H.G.
0.28 39.2 TaAffx.30652.1.S1_at CA623146 - - 3e-4 At2g30260 U2B'' (U2 small nuclear ribonucleoprotein B) S.X. H.G.
0.28 39.2 TaAffx.29371.1.S1_at CA644147 - - 4e+0 At5g18310 unknown protein S.X. H.G.
0.28 39.2 TaAffx.7765.1.S1_at CA650604 - - 2e-1 At4g33870 peroxidase, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
18.5 99.7 GSM298070 Leaf tissue of Paragon at 9 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
10.6 99.2 GSM298069 Leaf tissue of Paragon at 9 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
9.2 99.0 GSM250898 TcLr1_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.6 98.9 GSM298067 Leaf tissue of Paragon at 5 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
7.8 98.7 GSM298092 Crown tissue of Solstice at 3 weeks post germination GSE11774 Expression data from cold treated wheat cultivars
7.5 98.6 GSM298078 Leaf tissue of Solstice at 3 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
6.9 98.4 GSM298090 Leaf tissue of Solstice at 5 weeks post germination GSE11774 Expression data from cold treated wheat cultivars
6.9 98.4 GSM143513 Thatcher_Lr34 (resistant), mock inoculated distal leaf, replication 3 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
5.9 98.0 GSM111233 genotype H8 developing seed at 5 days after anthesis, biological rep2 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
5.6 97.8 GSM138207 genotype B11 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 4e-1 34 Ta.8132.1.S1_at BQ161400 - - 5e-1 At1g72290 trypsin and protease inhibitor family protein / Kunitz family protein C.G. S.X.
0.05 2e+0 32 TaAffx.118536.1.A1_at BJ320868 - - 7e-2 At4g00200 DNA binding C.G. S.X.
0.05 7e+0 30 TaAffx.93945.1.S1_at BG909883 - - 3e+0 At5g21940 unknown protein C.G. S.X.
0.02 7e+0 30 TaAffx.64992.1.S1_at BJ272400 - - 5e-1 At1g79070 SNARE-associated protein-related C.G. S.X.
0.04 7e+0 30 TaAffx.62939.1.S1_at CA728684 - - 3e-10 At4g37780 MYB87 (MYB DOMAIN PROTEIN 87) C.G. S.X.
0.04 7e+0 30 TaAffx.26837.1.S1_at CA684186 - - 2e+1 At5g47170 unknown protein C.G. S.X.
0.04 7e+0 30 TaAffx.131475.1.S1_at CA660574 - - 4e+0 At5g53860 emb2737 (embryo defective 2737) C.G. S.X.
0.04 7e+0 30 TaAffx.129513.2.A1_x_at BJ306606 - - 5e-18 At1g07890 APX1 (ascorbate peroxidase 1) C.G. S.X.
0.05 7e+0 30 TaAffx.104785.1.S1_at CA744839 - - 1e+1 At4g30280 XTH18 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 18) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e+0 32 Arabidopsis thaliana At3g16440 820892 ATMLP-300B (MYROSINASE-BINDING PROTEIN-LIKE PROTEIN-300B) myrosinase-binding protein-like protein (AtMLP-300B) mRNA, - - - C.G. S.X.
0.04 2e+0 32 Glycine max PsAffx.CL287Contig1_at PsAffx.CL287Contig1 - - 1e+0 At4g19865 kelch repeat-containing F-box family protein C.G. S.X.
0.04 1e+1 28 Hordeum vulgare Contig2488_s_at Contig2488 - - 3e-1 At3g29034 unknown protein C.G. S.X.
0.04 8e-1 34 Oryza sativa OsAffx.32179.1.S1_at - - - 0 C.G. S.X.
0.06 9e+0 30 Populus trichocarpa PtpAffx.220309.1.S1_at pmrna36679 hypothetical protein - 5e-1 At1g16770 unknown protein C.G. S.X.
0.04 8e+0 28 Vitis vinifera 1621504_at CF513310 - - 1e+0 At2g23620 MES1 (METHYL ESTERASE 1) C.G. S.X.
0.03 3e+0 30 Zea mays Zm.5126.1.A1_at CK145113 - - 3e-2 At5g66560 phototropic-responsive NPH3 family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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