Gene omics information

Query gene ID TaAffx.105650.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8192.4TaAffx.105650.1.S1_atCA732063--6e-3At2g38080IRX12 (IRREGULAR XYLEM 12)S.X.H.G.
0.9298.5TaAffx.73027.1.A1_atBE516792--2e-1At1g76920F-box family protein (FBX3)S.X.H.G.
0.9198.2TaAffx.70609.1.S1_atBQ802813--1e+0At1g62900O-methyltransferase, putativeS.X.H.G.
0.9094.8TaAffx.38658.1.S1_atBJ222843--4e+0At5g42290transcription activator-relatedS.X.H.G.
0.8694.1TaAffx.40634.3.S1_s_atCA664419--4e+0At3g06985LCR44 (Low-molecular-weight cysteine-rich 44)S.X.H.G.
0.8694.1TaAffx.120526.1.S1_atCA633945--4e+0At4g29640cytidine deaminase, putative / cytidine aminohydrolase, putativeS.X.H.G.
0.8694.1Ta.29471.1.S1_atCA639407--3e-1At1g24240ribosomal protein L19 family proteinS.X.H.G.
0.8694.1TaAffx.114113.1.S1_atCA598455--4e+0At5g24610unknown proteinS.X.H.G.
0.8694.1Ta.18201.1.A1_atCA631348--5e+0At5g4577560S ribosomal protein L11 (RPL11D)S.X.H.G.
0.8593.8Ta.27268.1.S1_atBT009115.1--7e-1At3g63420AGG1 (Arabidopsis Ggamma-subunit 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
79.4100.0GSM343678Wheat var. Kennedy_control_rep1GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
68.0100.0GSM343688Wheat var. Kennedy_Fp inoculated_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
57.799.9GSM343682Wheat var. Kennedy_control_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
52.899.9GSM343687Wheat var. Kennedy_Fp inoculated_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
46.099.9GSM343685Wheat var. Kennedy_control_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
26.299.8GSM343686Wheat var. Kennedy_Fp inoculated_rep1GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
7.298.5GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat development
3.695.6GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription survey
3.495.2GSM314262tissue type: seedling, root - rep3GSE12508Transcription patterns during wheat development
2.592.5GSM246396SB57_Stem_ rep1_at anthesisGSE9767Genotypic differences in water soluble carbohydrate metabolism in stem
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.443e-57222Ta.4455.2.S1_x_atBJ255523--3e-1At2g38080IRX12 (IRREGULAR XYLEM 12)C.G.S.X.
0.443e-57222Ta.4455.2.S1_atBJ255523--3e-1At2g38080IRX12 (IRREGULAR XYLEM 12)C.G.S.X.
0.374e-38159Ta.4048.3.S1_atBJ270853--3e-4At2g40370LAC5 (laccase 5)C.G.S.X.
0.082e-1583Ta.5619.1.S1_s_atBE430514--1e+0At2g40370LAC5 (laccase 5)C.G.S.X.
0.082e-1583Ta.5619.1.S1_x_atBE430514--1e+0At2g40370LAC5 (laccase 5)C.G.S.X.
0.055e-1065TaAffx.106165.1.S1_atCA723716--5e-2At2g40370LAC5 (laccase 5)C.G.S.X.
0.103e-859TaAffx.25388.1.S1_atCA700918--1e+0At1g47730F-box family proteinC.G.S.X.
0.034e-136TaAffx.9436.3.A1_atCA696125--1e+0At3g60540sec61beta family proteinC.G.S.X.
0.034e-136TaAffx.9436.2.S1_atCA684345--1e+0At3g60540sec61beta family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.066e-342Arabidopsis thalianaAt2g38080818386IRX12 (IRREGULAR XYLEM 12)Encodes a protein with similarity to putative laccase, a member of laccase family (17 members in Arabidopsis). Might be involved in cell wall biosynthesis. Mutants have a mild irregular xylem phenotype.---C.G.S.X.
0.032e+034Glycine maxPsAffx.CL2202Contig1_atPsAffx.CL2202Contig1--6e+0At5g4152040S ribosomal protein S10 (RPS10B)C.G.S.X.
0.041e-240Hordeum vulgareHV_CEb0003E06r2_atHV_CEb0003E06r2--6e-1At3g09280unknown proteinC.G.S.X.
0.271e-95351Oryza sativaOs05g0458600AK068047.1-Laccase (EC 1.10.3.2)2e-8At5g60020LAC17 (laccase 17)C.G.S.X.
0.024e-240Populus trichocarpaPtpAffx.59240.1.S1_s_atDN500909hypothetical protein-1e-13At3g43630nodulin, putativeC.G.S.X.
0.037e+030Vitis vinifera1616547_atBQ798895hypothetical protein LOC100256265-5e-21At5g23230NIC2 (NICOTINAMIDASE 2)C.G.S.X.
0.042e-136Zea maysZm.563.1.A1_atAF244703.1glutathione S-transferase GST 38-2e-3At1g59700ATGSTU16 (GLUTATHIONE S-TRANSFERASE TAU 16)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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