CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID TaAffx.105253.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.60 81.0 TaAffx.105253.1.S1_at CA737190 - - 4e+0 At4g10430 - S.X. H.G.
0.80 92.2 TaAffx.82073.1.S1_at CA677986 - - 3e-1 At1g29780 NLI interacting factor (NIF) family protein S.X. H.G.
0.73 89.1 TaAffx.56371.1.S1_at CA653232 - - 4e+0 At5g58560 phosphatidate cytidylyltransferase family protein S.X. H.G.
0.61 82.0 TaAffx.128541.6.S1_at CA680507 - - 6e+0 At4g23600 CORI3 (CORONATINE INDUCED 1) S.X. H.G.
0.60 81.0 TaAffx.105253.1.S1_x_at CA737190 - - 4e+0 At4g10430 - S.X. H.G.
0.50 72.4 TaAffx.107856.1.S1_at CA694359 - - 4e+0 At5g52605 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
17.5 99.7 GSM324493 Si+ B+ rep1 GSE12936 Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
17.1 99.6 GSM324487 Si- B+ rep1 GSE12936 Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
15.6 99.6 GSM324495 Si+ B+ rep3 GSE12936 Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
11.2 99.3 GSM324490 Si+ B- rep1 GSE12936 Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
8.9 99.0 GSM324492 Si+ B- rep3 GSE12936 Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
8.3 98.8 GSM324485 Si- B- rep2 GSE12936 Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
8.3 98.8 GSM298067 Leaf tissue of Paragon at 5 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
7.1 98.5 GSM315203 target strand labeled: Antisense - rep1 GSE12528 Wheat "Chinese Spring" natural antisense transcription survey
6.8 98.4 GSM324488 Si- B+ rep2 GSE12936 Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
6.7 98.4 GSM324486 Si- B- rep3 GSE12936 Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.76 2e-165 581 TaAffx.105253.1.S1_x_at CA737190 - - 4e+0 At4g10430 - C.G. S.X.
0.56 3e-56 218 TaAffx.105253.2.S1_at CA734932 - - 8e+0 At4g34050 caffeoyl-CoA 3-O-methyltransferase, putative C.G. S.X.
0.56 3e-56 218 TaAffx.105253.2.S1_x_at CA734932 - - 8e+0 At4g34050 caffeoyl-CoA 3-O-methyltransferase, putative C.G. S.X.
0.14 3e-10 65 TaAffx.15847.7.A1_at CA735491 - - 2e-1 At5g57560 TCH4 (Touch 4) C.G. S.X.
0.15 4e-9 61 TaAffx.77918.1.S1_at CA739857 - - 2e+0 At3g07590 small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putative C.G. S.X.
0.04 4e-3 42 TaAffx.98378.1.S1_at CA735372 - - 7e-2 At2g37035 unknown protein C.G. S.X.
0.04 4e-3 42 TaAffx.97533.4.S1_at CA667394 - - 6e-5 At2g28800 ALB3 (ALBINO 3) C.G. S.X.
0.04 4e-3 42 TaAffx.97533.4.S1_x_at CA667394 - - 6e-5 At2g28800 ALB3 (ALBINO 3) C.G. S.X.
0.03 4e-3 42 TaAffx.93953.1.S1_x_at CA671468 - - 2e-1 At3g07670 SET domain-containing protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 4e+0 32 Arabidopsis thaliana At4g10430 826635 - F:molecular_function unknown;P:biological_process unknown;C:integral to membrane;MPO - - - C.G. S.X.
0.07 2e-2 40 Glycine max GmaAffx.89866.1.A1_x_at CK605817 - - 4e+0 At3g07590 small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putative C.G. S.X.
0.04 7e+0 30 Hordeum vulgare HVSMEn0010C14f_at HVSMEn0010C14f - - 3e+0 At3g07640 unknown protein C.G. S.X.
0.02 1e-1 38 Oryza sativa Os.41694.1.S1_at - - - 0 C.G. S.X.
0.04 2e+1 30 Populus trichocarpa PtpAffx.80092.1.S1_at BU882525 hypothetical protein - 2e-4 At2g15910 CSL zinc finger domain-containing protein C.G. S.X.
0.04 1e+0 32 Vitis vinifera 1619992_at CD799698 - - 3e+0 At4g01680 MYB55 (myb domain protein 55) C.G. S.X.
0.04 2e-3 42 Zea mays Zm.997.1.A1_at CF059773 hypothetical protein LOC100275923 - 1e+0 At2g17040 anac036 (Arabidopsis NAC domain containing protein 36) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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