Gene omics information

Query gene ID TaAffx.102859.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8393.4TaAffx.102859.1.S1_atCA647205--3e-1At5g40250zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.7790.8Ta.27928.1.S1_atCD897790--2e+1At3g52510-S.X.H.G.
0.5779.2Ta.7012.2.S1_atCA708999--3e-15At1g79870oxidoreductase family proteinS.X.H.G.
0.5374.9Ta.7012.2.S1_x_atCA708999--3e-15At1g79870oxidoreductase family proteinS.X.H.G.
0.5072.4Ta.24358.1.S1_s_atCA611190--3e+0At1g224102-dehydro-3-deoxyphosphoheptonate aldolase, putative / 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, putative / DAHP synthetase, putativeS.X.H.G.
0.2633.6Ta.9591.2.S1_x_atCA688256--8e-1At3g10300calcium-binding EF hand family proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.897.2GSM324491Si+ B- rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
4.096.3GSM324490Si+ B- rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
3.996.1GSM324492Si+ B- rep3GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
3.795.8GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.695.6GSM324484Si- B- rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
3.695.6GSM324486Si- B- rep3GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
3.495.2GSM324485Si- B- rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
3.395.0GSM298079Leaf tissue of Solstice at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
3.294.8GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.194.5GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.083e-1789Ta.27585.1.S1_s_atCD892388--7e-1At5g23290PDF5 (PREFOLDIN 5)C.G.S.X.
0.023e-136TaAffx.59357.1.S1_atCA602400--2e-6At5g58440SNX2a (SORTING NEXIN 2a)C.G.S.X.
0.031e+034Ta.3235.1.S1_atBJ208992--7e-2At5g02220unknown proteinC.G.S.X.
0.011e+034Ta.2728.1.S1_atCD881214--5e-12At3g44880ACD1 (ACCELERATED CELL DEATH 1)C.G.S.X.
0.011e+034Ta.18.1.S1_atBJ241578--2e-113At1g54270EIF4A-2C.G.S.X.
0.021e+034Ta.16990.1.S1_atCA622260--1e+0At4g37530peroxidase, putativeC.G.S.X.
0.035e+032TaAffx.51600.1.S1_atCA723130--3e+0At3g52400SYP122 (SYNTAXIN OF PLANTS 122)C.G.S.X.
0.035e+032TaAffx.41896.1.S1_atBJ317569--4e+0At5g39860PRE1 (PACLOBUTRAZOL RESISTANCE1)C.G.S.X.
0.015e+032Ta.5100.2.S1_atBJ272656--5e-34At5g09590MTHSC70-2 (MITOCHONDRIAL HSP70 2)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e-136Arabidopsis thalianaAt5g40250834023zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFV---C.G.S.X.
0.033e+130Glycine maxPsAffx.psMC012xJ20f_atPsAffx.psMC012xJ20f--8e-1At3g12210sequence-specific DNA bindingC.G.S.X.
0.042e+032Hordeum vulgarerbaal29j24_atrbaal29j24--3e-1At5g22000RHF2A (RING-H2 GROUP F2A)C.G.S.X.
0.168e-22105Oryza sativaOs06g0233200AK108060.1-RING zinc finger protein-like6e-5At5g40250zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.032e+034Populus trichocarpaPtpAffx.220544.1.S1_atpmrna36948hypothetical protein-9e-2At2g23310ATRER1C1C.G.S.X.
0.044e-134Vitis vinifera1606711_atCF404554--3e+0At3g20610non-race specific disease resistance protein, putativeC.G.S.X.
0.201e-23109Zea maysZm.19057.1.A1_atCO525209--4e-2At5g05280zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage