Gene omics information

Query gene ID	Ta.9700.1.S1_x_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.57	79.2	Ta.9700.1.S1_x_at	CK154348	-	-	5e-6	At5g49030	OVA2 (ovule abortion 2)	S.X.	H.G.	Please select
0.63	83.1	Ta.29314.3.A1_a_at	AJ609767	-	-	4e+0	At5g18150	unknown protein	S.X.	H.G.	Please select
0.57	79.2	Ta.1434.1.A1_at	BE429591	-	-	3e+0	At5g18404	unknown protein	S.X.	H.G.	Please select
0.50	72.4	Ta.18426.1.S1_at	CA636348	-	-	4e+0	At1g67760	ATP binding / protein binding / unfolded protein binding	S.X.	H.G.	Please select
0.39	56.1	Ta.24652.1.S1_at	BT009053.1	-	-	2e-27	At4g17300	NS1	S.X.	H.G.	Please select
0.36	51.9	Ta.7493.1.S1_at	CK205703	-	-	2e+0	At3g53050	galactose-binding lectin family protein	S.X.	H.G.	Please select
0.35	49.8	Ta.17034.1.S1_s_at	CA616897	-	-	3e+0	At2g28870	unknown protein	S.X.	H.G.	Please select

Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
16.0	99.6	GSM343678	Wheat var. Kennedy_control_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
15.1	99.6	GSM343685	Wheat var. Kennedy_control_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
14.8	99.5	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
14.2	99.5	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
10.5	99.2	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
10.2	99.2	GSM343687	Wheat var. Kennedy_Fp inoculated_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
7.8	98.7	GSM343686	Wheat var. Kennedy_Fp inoculated_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
6.8	98.4	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.5	98.3	GSM139916	Anther leptotene-pachytene rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.0	98.0	GSM139929	Anther immature pollen rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.93	0	3521	Ta.9700.1.S1_at	CK154348	-	-	5e-6	At5g49030	OVA2 (ovule abortion 2)	C.G.	S.X.	Please select
0.01	7e-2	40	Ta.26130.1.A1_at	CD452879	-	-	6e-3	At5g41760	nucleotide-sugar transporter family protein	C.G.	S.X.	Please select
0.01	3e-1	38	Ta.2950.1.A1_at	CD864686	-	-	1e-27	At3g20790	oxidoreductase family protein	C.G.	S.X.	Please select
0.01	4e+0	34	TaAffx.92377.1.S1_at	BJ268677	-	-	4e+0	At5g11150	ATVAMP713 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 713)	C.G.	S.X.	Please select
0.01	4e+0	34	TaAffx.12181.3.S1_at	CA628624	-	-	1e+0	At3g13435	unknown protein	C.G.	S.X.	Please select
0.01	4e+0	34	Ta.932.3.S1_a_at	CA662320	-	-	1e-6	At1g49670	NQR	C.G.	S.X.	Please select
0.01	4e+0	34	Ta.932.3.S1_x_at	CA662320	-	-	1e-6	At1g49670	NQR	C.G.	S.X.	Please select
0.01	4e+0	34	Ta.3922.3.S1_x_at	CA623436	-	-	6e+0	At3g44310	NIT1	C.G.	S.X.	Please select
0.01	4e+0	34	Ta.3922.3.S1_at	CA623436	-	-	6e+0	At3g44310	NIT1	C.G.	S.X.	Please select

Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.08	5e-6	54	Arabidopsis thaliana	At5g49030	834962	OVA2 (ovule abortion 2)	F:nucleotide binding, isoleucine-tRNA ligase activity, aminoacyl-tRNA ligase activity, catalytic activity, ATP binding;P:ovule development, tRNA aminoacylation for protein translation;C:chloroplast;OBMAFP	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.13	2e-9	65	Glycine max	Gma.2159.1.S1_at	BI970548	-	-	3e-34	At5g49030	OVA2 (ovule abortion 2)	C.G.	S.X.	Please select
0.66	0	2976	Hordeum vulgare	Contig8638_at	Contig8638	-	-	2e-21	At5g49030	OVA2 (ovule abortion 2)	C.G.	S.X.	Please select
0.47	0	648	Oryza sativa	Os02g0778200	AK065948.1	-	Isoleucyl-tRNA synthetase, class Ia family protein	9e-18	At5g49030	OVA2 (ovule abortion 2)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.15	2e-9	65	Populus trichocarpa	PtpAffx.218657.1.S1_at	pmrna34354	hypothetical protein	-	2e-18	At5g49030	OVA2 (ovule abortion 2)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.01	1e+0	34	Vitis vinifera	1615238_at	CB345359	-	-	1e+0	At3g03690	UNE7 (unfertilized embryo sac 7)	C.G.	S.X.	Please select
0.01	5e-1	36	Zea mays	Zm.6036.1.S1_at	AY110222.1	cofactor required for Sp1 transcriptional activation subunit 9	-	1e-4	At5g03500	transcription coactivator	C.G.	S.X.	Please select

Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage