Gene omics information

Query gene ID	Ta.9685.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.64	83.6	Ta.9685.1.S1_at	BJ226436	-	-	7e-1	At3g05520	F-actin capping protein alpha subunit family protein	S.X.	H.G.	Please select
0.29	39.2	Ta.5793.1.A1_a_at	CD895981	-	-	4e-11	At5g55230	ATMAP65-1 (MICROTUBULE-ASSOCIATED PROTEINS 65-1)	S.X.	H.G.	Please select
0.29	39.2	Ta.4744.1.S1_a_at	BJ270946	-	-	5e-7	At3g55020	RabGAP/TBC domain-containing protein	S.X.	H.G.	Please select
0.29	39.2	Ta.7685.1.A1_at	CK166088	-	-	1e-63	At4g16340	SPK1 (SPIKE1)	S.X.	H.G.	Please select
0.27	35.6	Ta.16659.1.S1_at	CA601941	-	-	8e+0	At5g40980	unknown protein	S.X.	H.G.	Please select
0.23	29.0	Ta.26345.1.A1_at	CK197721	-	-	1e-7	At3g52115	ATGR1 (ARABIDOPSIS THALIANA GAMMA RESPONSE GENE 1)	S.X.	H.G.	Please select
0.20	24.0	Ta.28824.1.S1_at	BJ251117	-	-	2e-15	At1g21190	small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative	S.X.	H.G.	Please select
0.14	15.8	Ta.431.2.A1_x_at	BJ296777	-	-	8e-8	At5g43010	RPT4A	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
8.1	98.8	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.4	98.6	GSM314253	tissue type: germinating seed, coleoptile - rep3	GSE12508	Transcription patterns during wheat development
6.9	98.4	GSM139925	Anther tetrads rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.7	98.4	GSM314256	tissue type: germinating seed, root - rep3	GSE12508	Transcription patterns during wheat development
6.1	98.1	GSM139912	Anther pre-meiosis rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.1	98.1	GSM139927	Anther tetrads rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.0	98.0	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.0	98.0	GSM314254	tissue type: germinating seed, root - rep1	GSE12508	Transcription patterns during wheat development
6.0	98.0	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development
6.0	98.0	GSM139922	Anther telophaseI-telophaseII rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	2e-1	36	TaAffx.132743.7.S1_x_at	CA696164	-	-	1e-18	Atcg00070	-	C.G.	S.X.	Please select
0.04	2e-1	36	TaAffx.132743.6.S1_x_at	CA635620	-	-	9e-23	Atcg00070	-	C.G.	S.X.	Please select
0.05	2e-1	36	Ta.7298.2.S1_a_at	CN010351	-	-	3e-1	At5g25160	ZFP3 (ZINC FINGER PROTEIN 3)	C.G.	S.X.	Please select
0.04	2e-1	36	Ta.11340.1.A1_at	BQ169884	-	-	9e-1	At2g41870	remorin family protein	C.G.	S.X.	Please select
0.05	7e-1	34	TaAffx.82753.2.S1_at	CA667656	-	-	6e-1	At3g07590	small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putative	C.G.	S.X.	Please select
0.04	7e-1	34	Ta.8468.3.A1_x_at	CA744804	-	-	2e+1	At5g24313	unknown protein	C.G.	S.X.	Please select
0.03	3e+0	32	TaAffx.119007.1.A1_at	BJ297206	-	-	2e+0	At4g14746	-	C.G.	S.X.	Please select
0.02	3e+0	32	Ta.6164.1.S1_at	BJ215034	-	-	1e-1	At3g25400	-	C.G.	S.X.	Please select
0.04	3e+0	32	Ta.5603.1.A1_at	BJ286068	-	-	7e-11	At3g27020	YSL6 (YELLOW STRIPE LIKE 6)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	7e-1	34	Arabidopsis thaliana	At3g05520	819717	F-actin capping protein alpha subunit family protein	F:actin binding;P:actin cytoskeleton organization;C:nucleus, F-actin capping protein complex;MFOP	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.07	9e-1	34	Glycine max	Gma.1.1.A1_at	U36442.1	lipoxygenase	-	5e-1	At5g20180	ribosomal protein L36 family protein	C.G.	S.X.	Please select
0.40	3e-32	137	Hordeum vulgare	Contig14263_at	Contig14263	-	-	2e+0	At5g22650	HD2B (HISTONE DEACETYLASE 2B)	C.G.	S.X.	Please select
0.06	5e+0	32	Oryza sativa	OsAffx.32327.1.S1_x_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	4e+0	32	Populus trichocarpa	PtpAffx.221208.1.S1_at	pmrna37920	hypothetical protein	-	2e-1	At4g39330	CAD9 (CINNAMYL ALCOHOL DEHYDROGENASE 9)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	8e-1	32	Vitis vinifera	1622581_at	CF208711	-	-	2e-1	At5g44820	unknown protein	C.G.	S.X.	Please select
0.06	1e+0	32	Zea mays	ZmAffx.1438.1.S1_at	11990232-4	-	-	7e-18	Atcg00070	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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