Gene omics information

Query gene ID	Ta.9677.1.S1_x_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.77	90.8	Ta.9677.1.S1_x_at	CA652973	-	-	3e+1	At5g26692	-	S.X.	H.G.	Please select
0.73	89.1	Ta.9677.1.S1_a_at	CA652973	-	-	3e+1	At5g26692	-	S.X.	H.G.	Please select
0.60	81.0	Ta.21249.1.S1_at	CA698198	-	-	4e-1	At2g39630	glycosyl transferase family 2 protein	S.X.	H.G.	Please select
0.50	72.4	Ta.9677.3.S1_at	BQ620086	-	-	2e+0	At5g42420	transporter-related	S.X.	H.G.	Please select
0.43	62.2	Ta.16999.1.S1_x_at	CA648819	-	-	8e-6	At1g14290	SBH2 (SPHINGOID BASE HYDROXYLASE 2)	S.X.	H.G.	Please select
0.15	17.1	Ta.8034.1.A1_at	BQ161157	-	-	2e-3	At3g56480	myosin heavy chain-related	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
6.2	98.1	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.6	97.0	GSM298091	Leaf tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.4	96.8	GSM343685	Wheat var. Kennedy_control_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.1	96.4	GSM298069	Leaf tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.1	96.4	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.0	96.3	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
3.7	95.8	GSM343686	Wheat var. Kennedy_Fp inoculated_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
3.5	95.4	GSM143526	Thatcher_Lr34 (susceptible), mock inoculated distal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
3.5	95.4	GSM143519	Thatcher_Lr34 (susceptible), rust inoculated distal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
3.2	94.8	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.71	3e-156	551	Ta.9677.1.S1_a_at	CA652973	-	-	3e+1	At5g26692	-	C.G.	S.X.	Please select
0.40	3e-88	325	Ta.9677.3.S1_at	BQ620086	-	-	2e+0	At5g42420	transporter-related	C.G.	S.X.	Please select
0.13	7e-71	268	Ta.9677.2.S1_at	BQ579233	-	-	1e+0	At1g73730	EIL3 (ETHYLENE-INSENSITIVE3-LIKE3)	C.G.	S.X.	Please select
0.13	7e-71	268	Ta.9677.2.S1_x_at	BQ579233	-	-	1e+0	At1g73730	EIL3 (ETHYLENE-INSENSITIVE3-LIKE3)	C.G.	S.X.	Please select
0.24	4e-63	242	TaAffx.107456.1.S1_at	CA699572	-	-	4e+0	At1g20870	-	C.G.	S.X.	Please select
0.02	1e-1	38	TaAffx.128871.1.S1_at	CA631950	-	-	1e-1	At5g46780	VQ motif-containing protein	C.G.	S.X.	Please select
0.02	1e-1	38	Ta.7763.1.S1_at	CA681423	-	-	6e-7	At4g29590	methyltransferase	C.G.	S.X.	Please select
0.02	5e-1	36	TaAffx.99087.1.S1_at	CA719152	-	-	2e-13	At5g23300	PYRD (pyrimidine d)	C.G.	S.X.	Please select
0.02	5e-1	36	TaAffx.82929.1.S1_at	CA664766	-	-	2e+1	Atmg01100	-	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	3e+1	30	Arabidopsis thaliana	At5g26692	832711	-	Encodes a Plant thionin family protein	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	3e+0	34	Glycine max	GmaAffx.84490.1.S1_at	AW101087	-	-	8e+0	At5g44610	MAP18 (Microtubule-associated Protein 18)	C.G.	S.X.	Please select
0.38	1e-39	163	Hordeum vulgare	HVSMEa0017I09r2_s_at	HVSMEa0017I09r2	-	-	3e+0	At5g65220	ribosomal protein L29 family protein	C.G.	S.X.	Please select
0.14	1e-18	95	Oryza sativa	Os03g0324300	AK103227.1	-	EIL3	9e-2	At5g21120	EIL2 (ETHYLENE-INSENSITIVE3-LIKE 2)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	3e+0	34	Populus trichocarpa	PtpAffx.215881.1.S1_at	pmrna30330	hypothetical protein	-	1e-4	At3g21500	1-deoxy-D-xylulose-5-phosphate synthase	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	2e+0	32	Vitis vinifera	1613632_at	CB344801	-	-	9e-1	At3g44440	unknown protein	C.G.	S.X.	Please select
0.12	1e-20	99	Zea mays	Zm.4995.1.A1_at	CA401993	ETHYLENE-INSENSITIVE3-like 1 protein	-	1e-2	At3g20770	EIN3 (ETHYLENE-INSENSITIVE3)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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