CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.9630.2.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.71 88.0 Ta.9630.2.S1_at CA691213 - - 2e-1 At1g80160 lactoylglutathione lyase family protein / glyoxalase I family protein S.X. H.G.
0.40 58.4 TaAffx.85527.1.S1_at CA654072 - - 2e-4 At1g53320 AtTLP7 (TUBBY LIKE PROTEIN 7) S.X. H.G.
0.30 40.9 Ta.27758.1.A1_at CD913153 - - 5e+0 At5g64780 - S.X. H.G.
0.29 39.2 Ta.16326.1.S1_at BJ306642 - - 1e+0 At5g23950 C2 domain-containing protein S.X. H.G.
0.23 29.0 TaAffx.49165.1.S1_x_at CA640875 - - 2e+0 At1g80340 GA3OX2 (GIBBERELLIN 3-OXIDASE 2) S.X. H.G.
0.19 22.4 Ta.3053.1.S1_at BJ214585 - - 8e-6 At1g13450 DNA binding protein GT-1 S.X. H.G.
0.13 14.6 Ta.27257.1.S1_at BT009627.1 - - 3e+0 At5g06320 NHL3 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
20.1 99.7 GSM111233 genotype H8 developing seed at 5 days after anthesis, biological rep2 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
9.0 99.0 GSM298090 Leaf tissue of Solstice at 5 weeks post germination GSE11774 Expression data from cold treated wheat cultivars
7.1 98.5 GSM298070 Leaf tissue of Paragon at 9 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
6.0 98.0 GSM250916 TcLr1_7dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.8 97.2 GSM143504 Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 3 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.7 97.1 GSM143524 Thatcher_Lr34 (susceptible), mock inoculated distal leaf, replication 1 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.5 96.9 GSM138210 genotype B65 developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.3 96.7 GSM138144 Genotype RL4452 developing seed at 5 days after anthesis, biological rep1 location SB GSE5937 Wheat expression level polymorphism study parental genotypes 2 biological reps from SB location
4.3 96.7 GSM143503 Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 2 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.2 96.6 GSM143502 Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 1 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.95 0 894 Ta.9630.2.S1_a_at CA691213 - - 2e-1 At1g80160 lactoylglutathione lyase family protein / glyoxalase I family protein C.G. S.X.
0.95 0 894 Ta.9630.2.S1_x_at CA691213 - - 2e-1 At1g80160 lactoylglutathione lyase family protein / glyoxalase I family protein C.G. S.X.
0.61 1e-95 349 Ta.9630.1.S1_at BQ162450 - - 4e-1 At1g80160 lactoylglutathione lyase family protein / glyoxalase I family protein C.G. S.X.
0.04 6e-2 38 TaAffx.26346.1.S1_at CA689722 - - 9e-1 At3g50980 XERO1 (DEHYDRIN XERO 1) C.G. S.X.
0.02 6e-2 38 Ta.9278.1.S1_s_at CD492175 - - 2e-1 At5g63640 VHS domain-containing protein / GAT domain-containing protein C.G. S.X.
0.03 2e-1 36 TaAffx.23981.1.S1_at BQ609692 - - 2e+0 At1g71015 unknown protein C.G. S.X.
0.02 2e-1 36 Ta.4302.1.S1_at CA658460 - - 8e-35 At1g30120 PDH-E1 BETA (PYRUVATE DEHYDROGENASE E1 BETA) C.G. S.X.
0.04 2e-1 36 Ta.18002.1.S1_at CA627149 - - 3e+0 At3g15352 ATCOX17 C.G. S.X.
0.04 1e+0 34 TaAffx.28867.1.S1_at CA655268 - - 2e-1 At3g51810 EM1 (LATE EMBRYOGENESIS ABUNDANT 1) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 2e-1 36 Arabidopsis thaliana At1g80160 844356 lactoylglutathione lyase family protein / glyoxalase I family protein F:lactoylglutathione lyase activity;P:carbohydrate metabolic process;C:unknown;BPO - - - C.G. S.X.
0.03 3e-1 36 Glycine max PsAffx.CL950Contig1_at PsAffx.CL950Contig1 - - 8e-2 At5g28610 - C.G. S.X.
0.56 3e-48 190 Hordeum vulgare Contig17204_at Contig17204 - - 6e+0 At5g53030 unknown protein C.G. S.X.
0.03 5e-1 36 Oryza sativa Os04g0379100 9632.m02940 - - 7e-2 At5g63740 zinc finger protein-related C.G. S.X.
0.04 2e-2 40 Populus trichocarpa PtpAffx.218033.1.S1_at pmrna33544 hypothetical protein - 8e-1 At4g23870 unknown protein C.G. S.X.
0.04 2e+1 28 Vitis vinifera 1622183_at CD800964 - - 4e-1 At1g51330 serpin-related / serine protease inhibitor-related C.G. S.X.
0.04 2e+0 32 Zea mays ZmAffx.456.1.A1_at AI677202 - - 2e-1 At1g75770 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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