Gene omics information

Query gene ID	Ta.9619.1.S1_a_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	86.3	Ta.9619.1.S1_a_at	CD908424	-	-	8e-10	At3g48860	unknown protein	S.X.	H.G.	Please select
0.31	42.7	TaAffx.65308.1.A1_s_at	BJ251595	-	-	6e-1	At1g72820	mitochondrial substrate carrier family protein	S.X.	H.G.	Please select
0.12	13.3	TaAffx.118944.1.S1_at	CD923245	-	-	4e-1	At5g51720	unknown protein	S.X.	H.G.	Please select
0.09	10.4	TaAffx.112617.1.S1_at	CA727349	-	-	2e-13	At5g22370	QQT1 (QUATRE-QUART 1)	S.X.	H.G.	Please select
0.08	9.4	Ta.9442.1.S1_at	CK194226	-	-	9e-1	At2g04520	eukaryotic translation initiation factor 1A, putative / eIF-1A, putative / eIF-4C, putative	S.X.	H.G.	Please select
0.07	8.6	Ta.14606.1.S1_at	CA501669	-	-	5e-37	At4g05420	DDB1A (DAMAGED DNA BINDING PROTEIN 1A)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.8	97.2	GSM298075	Crown tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.3	96.7	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.2	96.6	GSM314270	tissue type: immature inflorescence - rep2	GSE12508	Transcription patterns during wheat development
3.8	96.0	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development
3.8	96.0	GSM111197	genotype J15 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.4	95.2	GSM314271	tissue type: immature inflorescence - rep3	GSE12508	Transcription patterns during wheat development
3.3	95.0	GSM111235	genotype F44 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.2	94.8	GSM314285	tissue type: 22 DAP embryo - rep2	GSE12508	Transcription patterns during wheat development
3.2	94.8	GSM298064	Crown tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.1	94.5	GSM314286	tissue type: 22 DAP embryo - rep3	GSE12508	Transcription patterns during wheat development

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.32	3e-77	289	TaAffx.30621.1.S1_at	CA623519	-	-	7e-8	At3g48860	unknown protein	C.G.	S.X.	Please select
0.08	8e-10	65	Ta.12977.1.S1_at	BE213668	-	-	4e-18	At3g48860	unknown protein	C.G.	S.X.	Please select
0.02	7e-1	36	TaAffx.117880.1.A1_at	BJ239785	-	-	1e+0	At2g47900	AtTLP3 (TUBBY LIKE PROTEIN 3)	C.G.	S.X.	Please select
0.02	3e+0	34	TaAffx.112833.1.S1_at	CA620486	-	-	1e+0	At2g16900	-	C.G.	S.X.	Please select
0.02	3e+0	34	Ta.6757.1.A1_at	CA602595	-	-	5e+0	At3g43432	unknown protein	C.G.	S.X.	Please select
0.01	3e+0	34	Ta.13841.1.S1_at	AJ440511	-	-	6e-5	At3g14680	CYP72A14	C.G.	S.X.	Please select
0.02	1e+1	32	TaAffx.93191.1.S1_at	BJ221099	-	-	1e+0	At3g06080	unknown protein	C.G.	S.X.	Please select
0.02	1e+1	32	TaAffx.85246.1.S1_at	CA624423	-	-	4e+0	At4g05100	AtMYB74 (myb domain protein 74)	C.G.	S.X.	Please select
0.02	1e+1	32	TaAffx.80348.1.S1_at	CA697960	-	-	4e+0	At2g34440	AGL29 (AGAMOUS-LIKE 29)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.14	8e-10	65	Arabidopsis thaliana	At3g48860	824047	unknown protein	F:unknown;P:biological_process unknown;C:plasma membrane;MOFBPAV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.12	7e-8	59	Glycine max	Gma.8638.1.A1_at	CA783239	-	-	5e-22	At5g13260	unknown protein	C.G.	S.X.	Please select
0.56	0	735	Hordeum vulgare	Contig14969_at	Contig14969	-	-	9e-2	At3g48860	unknown protein	C.G.	S.X.	Please select
0.50	4e-164	579	Oryza sativa	Os01g0928100	AK120714.1	-	Conserved hypothetical protein	5e-12	At3g48860	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.20	4e-6	54	Populus trichocarpa	PtpAffx.16082.2.S1_a_at	CV232704	hypothetical protein	-	2e-11	At5g13260	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.10	2e-13	75	Vitis vinifera	1617837_at	CB972171	hypothetical protein LOC100260846	-	1e-12	At5g13260	unknown protein	C.G.	S.X.	Please select
0.02	5e+0	32	Zea mays	Zm.3892.18.S1_a_at	AI746067	Elongation factor 1 alpha	-	2e-6	At1g35550	elongation factor Tu C-terminal domain-containing protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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