Gene omics information

Query gene ID	Ta.9607.1.A1_a_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.50	72.4	Ta.9607.1.A1_a_at	CA708572	-	-	5e+0	At5g24510	60s acidic ribosomal protein P1, putative	S.X.	H.G.	Please select
0.83	93.4	Ta.1905.2.A1_x_at	BE446722	-	-	2e-9	At2g30110	ATUBA1	S.X.	H.G.	Please select
0.71	88.0	Ta.7608.1.S1_x_at	CD452795	-	-	7e-5	At2g17200	ubiquitin family protein	S.X.	H.G.	Please select
0.67	86.3	Ta.7585.1.S1_at	CK206711	-	-	3e-9	At1g72710	CKL2 (CASEIN KINASE 1-LIKE PROTEIN 2)	S.X.	H.G.	Please select
0.57	79.2	Ta.1905.1.A1_a_at	CA657392	-	-	3e-24	At2g30110	ATUBA1	S.X.	H.G.	Please select
0.53	74.9	Ta.95.1.S1_at	M90663.1	-	-	4e-32	At2g30110	ATUBA1	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
2.7	93.3	GSM111187	genotype B68 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.6	92.9	GSM139923	Anther telophaseI-telophaseII rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.5	92.5	GSM138192	genotype B33 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.4	92.0	GSM138217	genotype H9 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.4	92.0	GSM139924	Anther telophaseI-telophaseII rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.4	92.0	GSM111247	genotype H10 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.4	92.0	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.4	92.0	GSM111179	genotype DH95 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.3	91.5	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.3	91.5	GSM139922	Anther telophaseI-telophaseII rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	1e-10	67	Ta.6526.1.S1_at	CD888973	-	-	4e-55	At3g14940	ATPPC3 (PHOSPHOENOLPYRUVATE CARBOXYLASE 3)	C.G.	S.X.	Please select
0.09	2e-9	63	Ta.9096.3.S1_at	CA717608	-	-	1e+0	At1g15260	unknown protein	C.G.	S.X.	Please select
0.13	2e-9	63	Ta.9096.2.S1_x_at	CA611772	-	-	1e-2	At3g14940	ATPPC3 (PHOSPHOENOLPYRUVATE CARBOXYLASE 3)	C.G.	S.X.	Please select
0.12	2e-9	63	Ta.9096.1.A1_at	BG906899	-	-	2e-2	At3g14940	ATPPC3 (PHOSPHOENOLPYRUVATE CARBOXYLASE 3)	C.G.	S.X.	Please select
0.09	2e-9	63	Ta.20784.1.S1_x_at	CA617300	-	-	4e+0	At3g14940	ATPPC3 (PHOSPHOENOLPYRUVATE CARBOXYLASE 3)	C.G.	S.X.	Please select
0.09	2e-9	63	Ta.20784.1.S1_at	CA617300	-	-	4e+0	At3g14940	ATPPC3 (PHOSPHOENOLPYRUVATE CARBOXYLASE 3)	C.G.	S.X.	Please select
0.19	4e-7	56	Ta.20511.1.S1_at	CD491115	-	-	2e+0	At1g80160	lactoylglutathione lyase family protein / glyoxalase I family protein	C.G.	S.X.	Please select
0.11	6e-6	52	TaAffx.12662.1.S1_at	BJ251737	-	-	1e+0	At3g42800	unknown protein	C.G.	S.X.	Please select
0.02	6e-6	52	Ta.81.1.S1_at	BU099491	phosphoenolpyruvate carboxylase	-	2e-43	At1g53310	ATPPC1 (PHOSPHOENOLPYRUVATE CARBOXYLASE 1)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	5e+0	32	Arabidopsis thaliana	At5g24510	832522	60s acidic ribosomal protein P1, putative	F:structural constituent of ribosome;P:translational elongation;C:cytosolic ribosome, ribosome;MFOPA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.09	1e-10	67	Glycine max	Gma.62.3.A1_at	BE658575	-	-	3e+0	At4g24440	transcription initiation factor IIA gamma chain / TFIIA-gamma (TFIIA-S)	C.G.	S.X.	Please select
0.51	9e-136	482	Hordeum vulgare	Contig11975_at	Contig11975	-	-	1e-23	At3g14940	ATPPC3 (PHOSPHOENOLPYRUVATE CARBOXYLASE 3)	C.G.	S.X.	Please select
0.09	7e-10	65	Oryza sativa	Os08g0366000	AY187619.1	-	Phosphoenolpyruvate carboxylase 2 (EC 4.1.1.31)(PEPCase 2) (CP28)	1e-72	At3g14940	ATPPC3 (PHOSPHOENOLPYRUVATE CARBOXYLASE 3)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.08	3e-8	59	Populus trichocarpa	Ptp.4602.1.S1_at	CK096847	hypothetical protein	-	4e-135	At3g14940	ATPPC3 (PHOSPHOENOLPYRUVATE CARBOXYLASE 3)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.07	1e-10	65	Vitis vinifera	1611103_at	CF215746	hypothetical protein LOC100267525	-	2e-128	At3g14940	ATPPC3 (PHOSPHOENOLPYRUVATE CARBOXYLASE 3)	C.G.	S.X.	Please select
0.26	1e-14	79	Zea mays	Zm.800.2.A1_at	AI714523	Phosphoenolpyruvate carboxylase	-	8e-5	At3g14940	ATPPC3 (PHOSPHOENOLPYRUVATE CARBOXYLASE 3)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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