Gene omics information

Query gene ID	Ta.9603.1.S1_s_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.48	69.0	Ta.9603.1.S1_s_at	BJ225210	-	-	1e+1	At4g14272	-	S.X.	H.G.	Please select
0.77	90.8	Ta.9330.1.S1_at	CN008838	-	-	1e-54	At1g14320	SAC52 (SUPPRESSOR OF ACAULIS 52)	S.X.	H.G.	Please select
0.75	89.8	Ta.7431.1.A1_at	CD889539	-	-	2e+0	At2g45010	unknown protein	S.X.	H.G.	Please select
0.71	88.0	Ta.5107.1.A1_at	BJ274031	-	-	5e-2	At5g10310	unknown protein	S.X.	H.G.	Please select
0.67	86.3	Ta.11813.1.A1_at	CK207632	-	-	5e+0	At1g53650	CID8 (CTC-INTERACTING DOMAIN 8)	S.X.	H.G.	Please select
0.67	86.3	Ta.4840.1.S1_at	CA704602	-	-	6e+0	At5g57640	-	S.X.	H.G.	Please select
0.59	79.8	Ta.10348.1.S1_a_at	CD894807	-	-	6e+0	At5g57640	-	S.X.	H.G.	Please select
0.48	69.0	Ta.9527.1.S1_x_at	BJ254990	-	-	1e+1	At5g44420	PDF1.2	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.7	95.8	GSM139926	Anther tetrads rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.6	95.6	GSM139930	Anther immature pollen rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.3	95.0	GSM138171	genotype C31 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.2	94.8	GSM138187	genotype F38b developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.2	94.8	GSM111245	genotype G13 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.1	94.5	GSM111189	genotype H9 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.1	94.5	GSM111174	genotype G30 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.1	94.5	GSM111195	genotype C25 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.1	94.5	GSM111188	genotype H9 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.0	94.3	GSM111176	genotype E5 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.47	1e-58	226	Ta.3199.1.S1_a_at	BJ207484	-	-	5e+0	At5g21940	unknown protein	C.G.	S.X.	Please select
0.04	2e-1	36	Ta.9579.3.S1_a_at	BJ222436	-	-	4e+0	At5g64395	unknown protein	C.G.	S.X.	Please select
0.04	2e-1	36	Ta.9579.3.S1_at	BJ222436	-	-	4e+0	At5g64395	unknown protein	C.G.	S.X.	Please select
0.04	2e-1	36	Ta.7488.3.S1_a_at	BJ269056	-	-	2e-14	At2g30200	[acyl-carrier-protein] S-malonyltransferase/ binding / catalytic/ transferase	C.G.	S.X.	Please select
0.04	8e-1	34	TaAffx.85122.1.S1_at	CA625423	-	-	6e-2	At1g21870	glucose-6-phosphate/phosphate translocator-related	C.G.	S.X.	Please select
0.02	8e-1	34	Ta.20011.1.S1_at	CK214522	-	-	1e+1	At5g47180	vesicle-associated membrane family protein / VAMP family protein	C.G.	S.X.	Please select
0.03	8e-1	34	Ta.1415.1.S1_at	BJ263114	-	-	2e-3	At1g47970	unknown protein	C.G.	S.X.	Please select
0.03	3e+0	32	TaAffx.85674.1.S1_at	CA620661	-	-	1e+0	At4g15093	catalytic LigB subunit of aromatic ring-opening dioxygenase family	C.G.	S.X.	Please select
0.03	3e+0	32	Ta.8819.2.S1_a_at	BJ296785	-	-	7e+0	At3g06280	-	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	1e+1	30	Arabidopsis thaliana	At4g14272	3769851	-	Encodes a defensin-like (DEFL) family protein.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	4e+0	32	Glycine max	HgAffx.6389.1.S1_at	CB825822	-	-	1e+0	At2g37300	unknown protein	C.G.	S.X.	Please select
0.28	1e-44	178	Hordeum vulgare	Contig14229_at	Contig14229	-	-	4e-2	At4g18910	NIP1	C.G.	S.X.	Please select
0.04	6e+0	32	Oryza sativa	OsAffx.17754.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.08	4e+0	32	Populus trichocarpa	PtpAffx.217203.1.S1_at	pmrna32371	hypothetical protein	-	3e-17	At2g29940	PDR3 (PLEIOTROPIC DRUG RESISTANCE 3)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	4e+0	30	Vitis vinifera	1620411_at	CB343828	hypothetical protein LOC100248931	-	2e-1	At2g14890	AGP9 (ARABINOGALACTAN PROTEIN 9)	C.G.	S.X.	Please select
0.04	2e+1	28	Zea mays	ZmAffx.319.1.A1_at	AI670501	-	-	3e+0	At5g15830	AtbZIP3 (Arabidopsis thaliana basic leucine-zipper 3)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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