Gene omics information

Query gene ID	Ta.9534.1.A1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	Ta.9534.1.A1_at	BQ161680	-	-	5e-11	At3g15380	choline transporter-related	S.X.	H.G.	Please select
0.67	86.3	Ta.28414.1.S1_at	CK168845	-	-	2e-5	At5g06850	C2 domain-containing protein	S.X.	H.G.	Please select
0.67	86.3	Ta.7752.1.S1_at	CA725241	-	-	9e-4	At3g17840	RLK902	S.X.	H.G.	Please select
0.50	72.4	Ta.7752.1.S1_x_at	CA725241	-	-	9e-4	At3g17840	RLK902	S.X.	H.G.	Please select
0.29	39.2	Ta.4837.2.A1_x_at	BJ219138	1,3-beta-glucan synthase 3-like	-	3e+1	At4g16460	unknown protein	S.X.	H.G.	Please select
0.12	13.3	Ta.1798.1.S1_at	CK213157	-	-	2e-2	At1g16860	merozoite surface protein-related	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
6.4	98.2	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.6	97.8	GSM139923	Anther telophaseI-telophaseII rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.2	97.5	GSM139920	Anther diplotene-anaphaseI rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.2	97.5	GSM139921	Anther diplotene-anaphaseI rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.0	97.4	GSM139912	Anther pre-meiosis rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.0	97.4	GSM139922	Anther telophaseI-telophaseII rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.0	97.4	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.8	97.2	GSM139927	Anther tetrads rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.6	97.0	GSM139925	Anther tetrads rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.3	96.7	GSM139919	Anther diplotene-anaphaseI rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.54	0	787	Ta.9534.2.A1_a_at	BJ307813	-	-	5e-6	At3g15380	choline transporter-related	C.G.	S.X.	Please select
0.26	2e-69	264	TaAffx.31027.1.S1_at	CA620201	-	-	1e-3	At3g15380	choline transporter-related	C.G.	S.X.	Please select
0.02	4e-2	40	Ta.5260.1.S1_at	BJ272092	-	-	5e+0	At5g01740	-	C.G.	S.X.	Please select
0.02	4e-2	40	Ta.25923.1.A1_at	CD454450	-	-	1e+0	At3g57700	protein kinase, putative	C.G.	S.X.	Please select
0.02	2e-1	38	TaAffx.51063.1.S1_at	CA731588	-	-	3e-1	At5g50175	unknown protein	C.G.	S.X.	Please select
0.02	7e-1	36	TaAffx.23584.1.S1_at	CA733085	-	-	6e-2	At2g36170	ubiquitin extension protein 2 (UBQ2) / 60S ribosomal protein L40 (RPL40A)	C.G.	S.X.	Please select
0.01	7e-1	36	Ta.5921.1.S1_at	CA722051	-	-	1e-2	At1g10740	unknown protein	C.G.	S.X.	Please select
0.01	7e-1	36	Ta.27505.1.S1_x_at	CA598526	-	-	2e-7	At1g78510	SPS1 (solanesyl diphosphate synthase 1)	C.G.	S.X.	Please select
0.02	3e+0	34	TaAffx.78639.2.S1_at	CA729748	-	-	4e+0	At5g07510	GRP14	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.12	5e-11	69	Arabidopsis thaliana	At3g15380	820777	choline transporter-related	F:unknown;P:biological_process unknown;C:plasma membrane;MOFP	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	9e-1	36	Glycine max	GmaAffx.65454.1.S1_at	BM521435	-	-	4e-15	At3g15380	choline transporter-related	C.G.	S.X.	Please select
0.63	0	1086	Hordeum vulgare	Contig21170_at	Contig21170	-	-	8e+0	At5g56910	-	C.G.	S.X.	Please select
0.42	0	640	Oryza sativa	Os04g0681600	AK105243.1	-	Protein of unknown function DUF580 family protein	4e-25	At3g15380	choline transporter-related	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.08	4e-9	63	Populus trichocarpa	PtpAffx.26449.1.S1_at	CK106723	hypothetical protein	-	3e+0	At5g53000	TAP46 (2A phosphatase associated protein of 46 kD)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.02	2e-1	36	Vitis vinifera	1617455_at	CF415586	hypothetical protein LOC100266938	-	6e-2	At4g10810	unknown protein	C.G.	S.X.	Please select
0.58	9e-165	579	Zea mays	Zm.1397.1.S1_at	CF051873	-	-	3e-12	At3g15380	choline transporter-related	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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