CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.946.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.2 Ta.946.1.S1_at BT009593.1 - - 2e-5 At4g35300 TMT2 (TONOPLAST MONOSACCHARIDE TRANSPORTER2) S.X. H.G.
0.29 39.2 Ta.27226.1.S1_at CD454502 - - 4e-12 At2g38670 PECT1 (PHOSPHORYLETHANOLAMINE CYTIDYLYLTRANSFERASE 1) S.X. H.G.
0.27 35.6 Ta.23753.1.A1_at BJ249329 - - 6e+0 At5g05110 cysteine protease inhibitor, putative / cystatin, putative S.X. H.G.
0.06 7.6 Ta.23012.1.S1_at AJ610851 - - 7e-20 At1g20200 EMB2719 (EMBRYO DEFECTIVE 2719) S.X. H.G.
0.03 4.7 Ta.23445.1.S1_at BJ261353 - - 1e+0 At3g25150 nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein S.X. H.G.
0.02 3.6 Ta.43.1.S1_at U22442.1 adenine phosphoribosyltransferase form 1 - 4e-11 At1g27450 APT1 (ADENINE PHOSPHORIBOSYL TRANSFERASE 1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
8.4 98.9 GSM314254 tissue type: germinating seed, root - rep1 GSE12508 Transcription patterns during wheat development
5.9 98.0 GSM314255 tissue type: germinating seed, root - rep2 GSE12508 Transcription patterns during wheat development
3.6 95.6 GSM314261 tissue type: seedling, root - rep2 GSE12508 Transcription patterns during wheat development
3.5 95.4 GSM314256 tissue type: germinating seed, root - rep3 GSE12508 Transcription patterns during wheat development
3.2 94.8 GSM314262 tissue type: seedling, root - rep3 GSE12508 Transcription patterns during wheat development
3.1 94.5 GSM314260 tissue type: seedling, root - rep1 GSE12508 Transcription patterns during wheat development
3.0 94.3 GSM298077 Leaf tissue of Solstice at 3 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
2.9 94.0 GSM314265 tissue type: seedling, crown - rep3 GSE12508 Transcription patterns during wheat development
2.8 93.6 GSM298072 Crown tissue of Paragon at 3 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
2.8 93.6 GSM138194 genotype J15 developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.21 9e-60 232 TaAffx.31149.1.S1_at CA619074 - - 7e-2 At1g20840 TMT1 (TONOPLAST MONOSACCHARIDE TRANSPORTER1) C.G. S.X.
0.25 3e-38 161 Ta.2669.1.S1_a_at CK153809 - - 3e-13 At4g35300 TMT2 (TONOPLAST MONOSACCHARIDE TRANSPORTER2) C.G. S.X.
0.25 3e-38 161 Ta.2669.1.S1_at CK153809 - - 3e-13 At4g35300 TMT2 (TONOPLAST MONOSACCHARIDE TRANSPORTER2) C.G. S.X.
0.09 2e-23 111 Ta.2669.3.S1_x_at CA689647 - - 2e-5 At3g51490 TMT3 (TONOPLAST MONOSACCHARIDE TRANSPORTER3) C.G. S.X.
0.03 2e-11 71 TaAffx.33701.1.S1_at CD909099 - - 2e+1 At5g20500 glutaredoxin, putative C.G. S.X.
0.02 2e-11 71 Ta.952.1.S1_s_at CK151774 - - 5e-2 At1g44970 peroxidase, putative C.G. S.X.
0.02 2e-11 71 Ta.6777.3.A1_a_at CA605335 - - 5e-4 At4g30480 tetratricopeptide repeat (TPR)-containing protein C.G. S.X.
0.02 2e-11 71 Ta.5412.2.S1_a_at CA639731 - - 2e-12 At4g05330 AGD13 (ARF-GAP domain 13) C.G. S.X.
0.03 8e-11 69 TaAffx.128482.2.S1_at CK215480 - - 2e-2 At3g10090 40S ribosomal protein S28 (RPS28A) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.11 2e-5 52 Arabidopsis thaliana At4g35300 829684 TMT2 (TONOPLAST MONOSACCHARIDE TRANSPORTER2) F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity, nucleoside transmembrane transporter activity;P:in 6 processes;C:plasma membrane, vacuole, membrane;BFMPOA - - - C.G. S.X.
0.14 7e-12 73 Glycine max Gma.8384.1.A1_at BG881817 - - 5e-4 At4g35300 TMT2 (TONOPLAST MONOSACCHARIDE TRANSPORTER2) C.G. S.X.
0.73 0 2740 Hordeum vulgare Contig6132_at Contig6132 - - 9e-8 At4g35300 TMT2 (TONOPLAST MONOSACCHARIDE TRANSPORTER2) C.G. S.X.
0.49 5e-140 500 Oryza sativa Os02g0229400 AK120560.1 - - 7e-12 At4g35300 TMT2 (TONOPLAST MONOSACCHARIDE TRANSPORTER2) C.G. S.X.
0.21 3e-14 81 Populus trichocarpa Ptp.6521.1.S1_at CV270263 hypothetical protein - 2e-7 At4g35300 TMT2 (TONOPLAST MONOSACCHARIDE TRANSPORTER2) C.G. S.X.
0.07 5e-12 71 Vitis vinifera 1611615_at CF405714 hypothetical protein LOC100264011 - 4e-17 At4g35300 TMT2 (TONOPLAST MONOSACCHARIDE TRANSPORTER2) C.G. S.X.
0.47 2e-77 289 Zea mays Zm.12169.1.S1_at CK370768 - - 1e+0 At4g35300 TMT2 (TONOPLAST MONOSACCHARIDE TRANSPORTER2) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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