Gene omics information

Query gene ID	Ta.9411.1.S1_x_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	86.3	Ta.9411.1.S1_x_at	BQ161375	-	-	5e-4	At1g16810	unknown protein	S.X.	H.G.	Please select
0.83	93.4	Ta.9411.2.S1_x_at	CK156676	-	-	1e-4	At1g16810	unknown protein	S.X.	H.G.	Please select
0.83	93.4	Ta.9411.3.S1_x_at	CA499635	-	-	2e-4	At1g16810	unknown protein	S.X.	H.G.	Please select
0.67	86.3	Ta.9411.1.S1_a_at	BQ161375	-	-	5e-4	At1g16810	unknown protein	S.X.	H.G.	Please select
0.36	51.9	Ta.6936.3.S1_x_at	BE445451	-	-	1e-9	At1g61700	DNA-directed RNA polymerase II, putative (RPB10)	S.X.	H.G.	Please select
0.27	35.6	Ta.6936.2.S1_x_at	CK207652	-	-	2e-9	At1g61700	DNA-directed RNA polymerase II, putative (RPB10)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
2.7	93.3	GSM138202	genotype F44 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.6	92.9	GSM138213	genotype C10 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.5	92.5	GSM111230	genotype B33 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.5	92.5	GSM138169	genotype B68 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.5	92.5	GSM138190	genotype D39 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.4	92.0	GSM138159	genotype F36 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.3	91.5	GSM138156	genotype DH91 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.3	91.5	GSM138214	genotype A77 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.2	91.0	GSM138198	genotype C22 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.2	91.0	GSM138193	genotype B33 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.93	0	1479	Ta.9411.1.S1_a_at	BQ161375	-	-	5e-4	At1g16810	unknown protein	C.G.	S.X.	Please select
0.60	0	958	Ta.9411.2.S1_x_at	CK156676	-	-	1e-4	At1g16810	unknown protein	C.G.	S.X.	Please select
0.47	2e-154	545	Ta.9411.3.S1_x_at	CA499635	-	-	2e-4	At1g16810	unknown protein	C.G.	S.X.	Please select
0.03	5e-4	46	TaAffx.78736.1.S1_at	CA727995	-	-	3e-1	At2g47485	unknown protein	C.G.	S.X.	Please select
0.04	2e-3	44	TaAffx.59230.1.S1_at	CA605645	-	-	3e-4	At1g65000	unknown protein	C.G.	S.X.	Please select
0.04	8e-3	42	TaAffx.71195.1.S1_at	BE492326	-	-	1e-2	At2g40830	RHC1A	C.G.	S.X.	Please select
0.03	8e-3	42	TaAffx.52006.1.S1_at	CA714803	-	-	3e+0	At1g01305	unknown protein	C.G.	S.X.	Please select
0.03	3e-2	40	TaAffx.51996.1.S1_at	CA715048	-	-	3e+0	At5g47080	CKB1	C.G.	S.X.	Please select
0.04	3e-2	40	Ta.9338.3.S1_x_at	CA593592	-	-	3e-7	At5g64460	-	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	5e-4	46	Arabidopsis thaliana	At1g16810	838252	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOP	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	1e-2	42	Glycine max	GmaAffx.44482.1.S1_at	BE475065	-	-	8e-20	At5g42560	abscisic acid-responsive HVA22 family protein	C.G.	S.X.	Please select
0.83	0	936	Hordeum vulgare	Contig5339_s_at	Contig5339	-	-	3e-2	At2g16015	unknown protein	C.G.	S.X.	Please select
0.39	1e-86	321	Oryza sativa	Os02g0727500	AK121427.1	-	Conserved hypothetical protein	3e-2	At1g16810	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	2e-1	38	Populus trichocarpa	PtpAffx.26510.1.A1_s_at	CK094755	-	-	5e-1	At3g23245	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	9e-6	50	Vitis vinifera	1615071_at	CF512279	-	-	6e-13	At1g16810	unknown protein	C.G.	S.X.	Please select
0.30	1e-18	93	Zea mays	Zm.10394.1.S1_at	BQ163241	hypothetical protein LOC100276017	-	5e-3	At1g16810	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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